RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 IRX4P78413 519 aa17.23■□□□□ 0.35
PTCHD3P3-201ENST00000403073 OLIG2Q13516 323 aa17.23■□□□□ 0.35
PTCHD3P3-201ENST00000403073 SPARCL1Q14515 664 aa17.23■□□□□ 0.35
PTCHD3P3-201ENST00000403073 STAT4Q14765 748 aa17.23■□□□□ 0.35
PTCHD3P3-201ENST00000403073 ACOX1Q15067 660 aa17.23■□□□□ 0.35
PTCHD3P3-201ENST00000403073 CNGA3Q16281 694 aa17.23■□□□□ 0.35
PTCHD3P3-201ENST00000403073 CSRP2Q16527 193 aa17.23■□□□□ 0.35
PTCHD3P3-201ENST00000403073 CYP1B1Q16678 543 aa17.23■□□□□ 0.35
PTCHD3P3-201ENST00000403073 SIRPB2Q5JXA9 342 aa17.23■□□□□ 0.35
PTCHD3P3-201ENST00000403073 SLC23A3Q6PIS1 610 aa17.23■□□□□ 0.35
PTCHD3P3-201ENST00000403073 HSD11B1LQ7Z5J1 315 aa17.23■□□□□ 0.35
PTCHD3P3-201ENST00000403073 ZSCAN30Q86W11 494 aa17.23■□□□□ 0.35
PTCHD3P3-201ENST00000403073 CBARPQ8N350 705 aaPredicted RBP17.23■□□□□ 0.35
PTCHD3P3-201ENST00000403073 C12orf50Q8NA57 414 aaPredicted RBP17.23■□□□□ 0.35
PTCHD3P3-201ENST00000403073 ATL2Q8NHH9 583 aa17.23■□□□□ 0.35
PTCHD3P3-201ENST00000403073 ASB12Q8WXK4 309 aa17.23■□□□□ 0.35
PTCHD3P3-201ENST00000403073 KLF6Q99612 283 aaPredicted RBP17.23■□□□□ 0.35
PTCHD3P3-201ENST00000403073 APOL2Q9BQE5 337 aa17.23■□□□□ 0.35
PTCHD3P3-201ENST00000403073 FICDQ9BVA6 458 aa17.23■□□□□ 0.35
PTCHD3P3-201ENST00000403073 SLC6A14Q9UN76 642 aa17.23■□□□□ 0.35
PTCHD3P3-201ENST00000403073 PRR5-ARHGAP8B1AHC4 643 aa17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 PDE2AO00408 941 aaPredicted RBP17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 RECQL5O94762 991 aaPredicted RBP17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 CLDN7O95471 211 aa17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 EPOP01588 193 aa17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 WNT1P04628 370 aa17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 ADRA1AP35348 466 aa17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 ACTN2P35609 894 aa17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 AFF3P51826 1226 aaKnown RBP17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 PTSQ03393 145 aa17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 ARHGEF7Q14155 803 aa17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 SLC1A5Q15758 541 aa17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 CDKN3Q16667 212 aa17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 LRRC66Q68CR7 880 aa17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 CCDC137Q6PK04 289 aaKnown RBP17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 KDM7AQ6ZMT4 941 aa17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 RFLNAQ6ZTI6 216 aa17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 RABEPKQ7Z6M1 372 aa17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 ALYREFQ86V81 257 aaKnown RBP17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 PDCD7Q8N8D1 485 aaKnown RBP17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 TMEM145Q8NBT3 493 aa17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 CENPTQ96BT3 561 aa17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 COQ10AQ96MF6 247 aa17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 LENG8Q96PV6 779 aaPredicted RBP17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 FSD1LQ9BXM9 530 aa17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 ETNK1Q9HBU6 452 aa17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 CAPN10Q9HC96 672 aa17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 MBNL1Q9NR56 388 aaKnown RBP17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 SPO11Q9Y5K1 396 aa17.22■□□□□ 0.35
PTCHD3P3-201ENST00000403073 NUMA1Q14980 2115 aa17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 MYO15AQ9UKN7 3530 aa17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 DMDP11532 3685 aa17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 VPS13AQ96RL7 3174 aa17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 GOLGA6L10A0A0M3HER8 536 aa17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 A0A1B0GVT2 93 aa17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 A0A1W2PR77 199 aa17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 H0Y8X5 98 aa17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 LRP3O75074 770 aa17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 PHF2O75151 1096 aa17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 USP12O75317 370 aa17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 CD38P28907 300 aa17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 PAFAH1B1P43034 410 aa17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 TNNT3P45378 269 aaPredicted RBP17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 BNC1Q01954 994 aa17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 TRIP13Q15645 432 aaPredicted RBP17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 WSCD2Q2TBF2 565 aa17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 KCTD11Q693B1 232 aa17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 RANBP10Q6VN20 620 aa17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 GCNT7Q6ZNI0 430 aa17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 KLHDC8BQ8IXV7 354 aa17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 TP53I13Q8NBR0 393 aaPredicted RBP17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 BMFQ96LC9 184 aa17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 PPP1R2P1Q96PQ5 205 aa17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 LYSMD1Q96S90 227 aa17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 RAB6BQ9NRW1 208 aa17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 PAK5Q9P286 719 aa17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 SHOC2Q9UQ13 582 aa17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 HS3ST3A1Q9Y663 406 aa17.21■□□□□ 0.35
PTCHD3P3-201ENST00000403073 C1orf232A0A0U1RR37 186 aa17.2■□□□□ 0.34
PTCHD3P3-201ENST00000403073 POM121BA6NF01 834 aa17.2■□□□□ 0.34
PTCHD3P3-201ENST00000403073 FPGTO14772 594 aa17.2■□□□□ 0.34
PTCHD3P3-201ENST00000403073 C1SP09871 688 aa17.2■□□□□ 0.34
PTCHD3P3-201ENST00000403073 ETV3P41162 512 aa17.2■□□□□ 0.34
PTCHD3P3-201ENST00000403073 LMNB2Q03252 620 aa17.2■□□□□ 0.34
PTCHD3P3-201ENST00000403073 LRRC14Q15048 493 aa17.2■□□□□ 0.34
PTCHD3P3-201ENST00000403073 TEAD4Q15561 434 aa17.2■□□□□ 0.34
PTCHD3P3-201ENST00000403073 PRR23CQ6ZRP0 262 aa17.2■□□□□ 0.34
PTCHD3P3-201ENST00000403073 Q6ZVL8 140 aa17.2■□□□□ 0.34
PTCHD3P3-201ENST00000403073 LYSMD3Q7Z3D4 306 aa17.2■□□□□ 0.34
PTCHD3P3-201ENST00000403073 MFSD2AQ8NA29 543 aa17.2■□□□□ 0.34
PTCHD3P3-201ENST00000403073 ZNF592Q92610 1267 aa17.2■□□□□ 0.34
PTCHD3P3-201ENST00000403073 EID2BQ96D98 161 aa17.2■□□□□ 0.34
PTCHD3P3-201ENST00000403073 TBL1YQ9BQ87 522 aa17.2■□□□□ 0.34
PTCHD3P3-201ENST00000403073 C1QTNF7Q9BXJ2 289 aa17.2■□□□□ 0.34
PTCHD3P3-201ENST00000403073 NUSAP1Q9BXS6 441 aaKnown RBP17.2■□□□□ 0.34
PTCHD3P3-201ENST00000403073 DDX47Q9H0S4 455 aaKnown RBP17.2■□□□□ 0.34
PTCHD3P3-201ENST00000403073 MAGEE1Q9HCI5 957 aa17.2■□□□□ 0.34
PTCHD3P3-201ENST00000403073 RXFP3Q9NSD7 469 aa17.2■□□□□ 0.34
PTCHD3P3-201ENST00000403073 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.2■□□□□ 0.34
PTCHD3P3-201ENST00000403073 THADAQ6YHU6 1953 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms