RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 SIX2Q9NPC8 291 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 MSRAQ9UJ68 235 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 RPP40O75818 363 aaKnown RBP18.22■□□□□ 0.51
COL18A1-204ENST00000400337 LRATO95237 230 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 RHOQP17081 205 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 MPSTP25325 297 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 LMO2P25791 158 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 AP5B1Q2VPB7 878 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 ANKS1BQ7Z6G8 1248 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 GPR180Q86V85 440 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 CD101Q93033 1021 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 DEPDC7Q96QD5 511 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 NTPCRQ9BSD7 190 aaKnown RBP18.22■□□□□ 0.51
COL18A1-204ENST00000400337 KLHL25Q9H0H3 589 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 ACSS2Q9NR19 701 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 MAPRE3Q9UPY8 281 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 KCNE2Q9Y6J6 123 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 MYL12BO14950 172 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 ANPEPP15144 967 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 SKA1Q96BD8 255 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 ACBD6Q9BR61 282 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 GBA3Q9H227 469 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 C12orf65Q9H3J6 166 aaKnown RBP18.22■□□□□ 0.51
COL18A1-204ENST00000400337 ZFYVE1Q9HBF4 777 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 MYBPHLA2RUH7 354 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 C2CD4BA6NLJ0 364 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 SLC9A5Q14940 896 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 SPESP1Q6UW49 350 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 SPACA7Q96KW9 195 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 SDCBP2Q9H190 292 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 ZNF510Q9Y2H8 683 aa18.22■□□□□ 0.51
COL18A1-204ENST00000400337 AP2A1O95782 977 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 IDO1P14902 403 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 TACR2P21452 398 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 TLX1P31314 330 aaPredicted RBP18.21■□□□□ 0.51
COL18A1-204ENST00000400337 TNK2Q07912 1038 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 DGCR6Q14129 220 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 RNASEH2BQ5TBB1 312 aaKnown RBP18.21■□□□□ 0.51
COL18A1-204ENST00000400337 ZNF544Q6NX49 715 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 COLGALT2Q8IYK4 626 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 RGL4Q8IZJ4 473 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 ZCCHC7Q8N3Z6 543 aaKnown RBP18.21■□□□□ 0.51
COL18A1-204ENST00000400337 EMID1Q96A84 441 aaPredicted RBP18.21■□□□□ 0.51
COL18A1-204ENST00000400337 MYOCQ99972 504 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 SYT17Q9BSW7 474 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 PAIP1Q9H074 479 aaKnown RBP18.21■□□□□ 0.51
COL18A1-204ENST00000400337 EPB41L4BQ9H329 900 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 ASF1AQ9Y294 204 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 NPEPPSL1A6NEC2 478 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 C5orf60A6NFR6 353 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 AGRPO00253 132 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 PPIDQ08752 370 aaKnown RBP18.21■□□□□ 0.51
COL18A1-204ENST00000400337 PPM1JQ5JR12 505 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 GPR158Q5T848 1215 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 C19orf18Q8NEA5 215 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 SPATA22Q8NHS9 363 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 RPS6KA6Q9UK32 745 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 NR2E1Q9Y466 385 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 DSC2Q02487 901 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 TAC4Q86UU9 113 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 FAIM2Q9BWQ8 316 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 RAI2Q9Y5P3 530 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 AMD1P17707 334 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 RABGGTBP53611 331 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 DLG2Q15700 870 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 ZNF567Q8N184 647 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 ZNF655Q8N720 491 aaPredicted RBP18.21■□□□□ 0.51
COL18A1-204ENST00000400337 NELL1Q92832 810 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 MFSD3Q96ES6 412 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 PANX1Q96RD7 426 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 ADAM30Q9UKF2 790 aa18.21■□□□□ 0.51
COL18A1-204ENST00000400337 TMEM88BA6NKF7 163 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 C22orf31O95567 290 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 CYLDQ9NQC7 956 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 ARL8BQ9NVJ2 186 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 C2orf71A6NGG8 1288 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 PRMT5O14744 637 aaPredicted RBP18.2■□□□□ 0.5
COL18A1-204ENST00000400337 CCNCP24863 283 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 KHDRBS2Q5VWX1 349 aaKnown RBP18.2■□□□□ 0.5
COL18A1-204ENST00000400337 CRTC3Q6UUV7 619 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 MACC1Q6ZN28 852 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 LDB1Q86U70 411 aaPredicted RBP18.2■□□□□ 0.5
COL18A1-204ENST00000400337 AADATQ8N5Z0 425 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 TRMOQ9BU70 441 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 SNX10Q9Y5X0 201 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 TIGD2Q4W5G0 525 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 ZNF697Q5TEC3 545 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 FAM46CQ5VWP2 391 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 LINGO4Q6UY18 593 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 AMIGO2Q86SJ2 522 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 DAW1Q8N136 415 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 C12orf50Q8NA57 414 aaPredicted RBP18.2■□□□□ 0.5
COL18A1-204ENST00000400337 NXNL1Q96CM4 212 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 NPAS2Q99743 824 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 FZD8Q9H461 694 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 FYNP06241 537 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 LAG3P18627 525 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 MAGEA10P43363 369 aaPredicted RBP18.2■□□□□ 0.5
COL18A1-204ENST00000400337 C16orf72Q14CZ0 275 aa18.2■□□□□ 0.5
COL18A1-204ENST00000400337 ARHGAP36Q6ZRI8 547 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms