RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 INPP4BO15327 924 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 CLASP2O75122 1294 aaKnown RBP14.03□□□□□ -0.16
APOB-202ENST00000399256 SNAP29O95721 258 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 TXNP10599 105 aaKnown RBP14.03□□□□□ -0.16
APOB-202ENST00000399256 GPX3P22352 226 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 EEF1B2P24534 225 aaKnown RBP14.03□□□□□ -0.16
APOB-202ENST00000399256 CAPGP40121 348 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 KPNA2P52292 529 aaKnown RBP14.03□□□□□ -0.16
APOB-202ENST00000399256 ATP6V0D1P61421 351 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 IRAK1BP1Q5VVH5 260 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 LARP4Q71RC2 724 aaKnown RBP eCLIP14.03□□□□□ -0.16
APOB-202ENST00000399256 ZNF354CQ86Y25 554 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 RIOX2Q8IUF8 465 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 CNTN4Q8IWV2 1026 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 AQP12AQ8IXF9 295 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 CRYBG2Q8N1P7 616 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 BEST2Q8NFU1 509 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 CHPT1Q8WUD6 406 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 TBL1YQ9BQ87 522 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 FICDQ9BVA6 458 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 ATXN3LQ9H3M9 355 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 MRGBPQ9NV56 204 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 CMTM6Q9NX76 183 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 CFAP99D6REC4 459 aa14.02□□□□□ -0.16
APOB-202ENST00000399256 ARPC2O15144 300 aa14.02□□□□□ -0.16
APOB-202ENST00000399256 NCAM2O15394 837 aa14.02□□□□□ -0.16
APOB-202ENST00000399256 SNAP91O60641 907 aa14.02□□□□□ -0.16
APOB-202ENST00000399256 USP2O75604 605 aaPredicted RBP14.02□□□□□ -0.16
APOB-202ENST00000399256 SUPT7LO94864 414 aa14.02□□□□□ -0.16
APOB-202ENST00000399256 KCNH1O95259 989 aa14.02□□□□□ -0.16
APOB-202ENST00000399256 IDO1P14902 403 aa14.02□□□□□ -0.16
APOB-202ENST00000399256 NCK1P16333 377 aa14.02□□□□□ -0.16
APOB-202ENST00000399256 CCNA2P20248 432 aa14.02□□□□□ -0.16
APOB-202ENST00000399256 CAPN3P20807 821 aa14.02□□□□□ -0.16
APOB-202ENST00000399256 DNAJB1P25685 340 aa14.02□□□□□ -0.16
APOB-202ENST00000399256 RAB15P59190 212 aa14.02□□□□□ -0.16
APOB-202ENST00000399256 CYP2A13Q16696 494 aa14.02□□□□□ -0.16
APOB-202ENST00000399256 CYP51A1Q16850 503 aa14.02□□□□□ -0.16
APOB-202ENST00000399256 CYBRD1Q53TN4 286 aa14.02□□□□□ -0.16
APOB-202ENST00000399256 LDLRAP1Q5SW96 308 aa14.02□□□□□ -0.16
APOB-202ENST00000399256 NOL9Q5SY16 702 aaKnown RBP14.02□□□□□ -0.16
APOB-202ENST00000399256 ARHGAP36Q6ZRI8 547 aa14.02□□□□□ -0.16
APOB-202ENST00000399256 BNIPLQ7Z465 357 aa14.02□□□□□ -0.16
APOB-202ENST00000399256 ZC3H15Q8WU90 426 aaKnown RBP14.02□□□□□ -0.16
APOB-202ENST00000399256 EIF2AQ9BY44 585 aaKnown RBP14.02□□□□□ -0.16
APOB-202ENST00000399256 SEZ6LQ9BYH1 1024 aa14.02□□□□□ -0.16
APOB-202ENST00000399256 FANCEQ9HB96 536 aa14.02□□□□□ -0.16
APOB-202ENST00000399256 SMPD3Q9NY59 655 aaPredicted RBP14.02□□□□□ -0.16
APOB-202ENST00000399256 ERAP1Q9NZ08 941 aa14.02□□□□□ -0.16
APOB-202ENST00000399256 TCAF1Q9Y4C2 921 aa14.02□□□□□ -0.16
APOB-202ENST00000399256 NCAM1P13591 858 aa14.02□□□□□ -0.17
APOB-202ENST00000399256 ELK4P28324 431 aa14.02□□□□□ -0.17
APOB-202ENST00000399256 SLC26A2P50443 739 aa14.02□□□□□ -0.17
APOB-202ENST00000399256 TMTC4Q5T4D3 741 aa14.02□□□□□ -0.17
APOB-202ENST00000399256 FAM117BQ6P1L5 589 aa14.02□□□□□ -0.17
APOB-202ENST00000399256 SPRED1Q7Z699 444 aa14.02□□□□□ -0.17
APOB-202ENST00000399256 LINC00523Q86TU6 105 aa14.02□□□□□ -0.17
APOB-202ENST00000399256 TERB1Q8NA31 727 aa14.02□□□□□ -0.17
APOB-202ENST00000399256 PPHLN1Q8NEY8 458 aaKnown RBP14.02□□□□□ -0.17
APOB-202ENST00000399256 EXT2Q93063 718 aa14.02□□□□□ -0.17
APOB-202ENST00000399256 C19orf60Q96EN9 201 aa14.02□□□□□ -0.17
APOB-202ENST00000399256 FEM1CQ96JP0 617 aa14.02□□□□□ -0.17
APOB-202ENST00000399256 MYRFLQ96LU7 910 aa14.02□□□□□ -0.17
APOB-202ENST00000399256 SPATC1LQ9H0A9 340 aa14.02□□□□□ -0.17
APOB-202ENST00000399256 GSTO2Q9H4Y5 243 aa14.02□□□□□ -0.17
APOB-202ENST00000399256 AKTIPQ9H8T0 292 aa14.02□□□□□ -0.17
APOB-202ENST00000399256 PLEKHA5Q9HAU0 1116 aa14.02□□□□□ -0.17
APOB-202ENST00000399256 PKD2L2Q9NZM6 624 aa14.02□□□□□ -0.17
APOB-202ENST00000399256 IFT80Q9P2H3 777 aaPredicted RBP14.02□□□□□ -0.17
APOB-202ENST00000399256 FBXO5Q9UKT4 447 aa14.02□□□□□ -0.17
APOB-202ENST00000399256 DSEQ9UL01 958 aa14.02□□□□□ -0.17
APOB-202ENST00000399256 LOC285556D6RIA3 1793 aa14.02□□□□□ -0.17
APOB-202ENST00000399256 ANGPT2O15123 496 aa14.01□□□□□ -0.17
APOB-202ENST00000399256 MTSS1O43312 755 aa14.01□□□□□ -0.17
APOB-202ENST00000399256 SULT1C4O75897 302 aa14.01□□□□□ -0.17
APOB-202ENST00000399256 CHRNA4P43681 627 aa14.01□□□□□ -0.17
APOB-202ENST00000399256 CDH13P55290 713 aa14.01□□□□□ -0.17
APOB-202ENST00000399256 SEMA3BQ13214 749 aa14.01□□□□□ -0.17
APOB-202ENST00000399256 RGS21Q2M5E4 152 aa14.01□□□□□ -0.17
APOB-202ENST00000399256 FBXO47Q5MNV8 452 aa14.01□□□□□ -0.17
APOB-202ENST00000399256 NIPAL1Q6NVV3 410 aa14.01□□□□□ -0.17
APOB-202ENST00000399256 LRRC52Q8N7C0 313 aa14.01□□□□□ -0.17
APOB-202ENST00000399256 SNX27Q96L92 541 aa14.01□□□□□ -0.17
APOB-202ENST00000399256 GOLGA2P5Q9HBQ8 144 aa14.01□□□□□ -0.17
APOB-202ENST00000399256 WDR6Q9NNW5 1121 aaKnown RBP14.01□□□□□ -0.17
APOB-202ENST00000399256 GNPTGQ9UJJ9 305 aa14.01□□□□□ -0.17
APOB-202ENST00000399256 IQCA1LA6NCM1 817 aa14.01□□□□□ -0.17
APOB-202ENST00000399256 SOBPA7XYQ1 873 aa14.01□□□□□ -0.17
APOB-202ENST00000399256 FYNP06241 537 aa14.01□□□□□ -0.17
APOB-202ENST00000399256 RPS9P46781 194 aaKnown RBP14.01□□□□□ -0.17
APOB-202ENST00000399256 APLP1P51693 650 aa14.01□□□□□ -0.17
APOB-202ENST00000399256 TKTL1P51854 596 aa14.01□□□□□ -0.17
APOB-202ENST00000399256 MLLT10P55197 1068 aa14.01□□□□□ -0.17
APOB-202ENST00000399256 ZIK1Q3SY52 487 aaPredicted RBP14.01□□□□□ -0.17
APOB-202ENST00000399256 LCN8Q6JVE9 175 aa14.01□□□□□ -0.17
APOB-202ENST00000399256 IFNLR1Q8IU57 520 aaPredicted RBP14.01□□□□□ -0.17
APOB-202ENST00000399256 BPIFB6Q8NFQ5 453 aa14.01□□□□□ -0.17
APOB-202ENST00000399256 ANKRD49Q8WVL7 239 aa14.01□□□□□ -0.17
APOB-202ENST00000399256 YIPF2Q9BWQ6 316 aa14.01□□□□□ -0.17
APOB-202ENST00000399256 MAF1Q9H063 256 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms