RNA–Protein interactions for RNA: ENST00000398465.3

VPREB3-202, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

TSL 3 BASIC

Gene VPREB3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-202ENST00000398465 ATL2Q8NHH9 583 aa12.81□□□□□ -0.36
VPREB3-202ENST00000398465 TFB1MQ8WVM0 346 aaKnown RBP12.81□□□□□ -0.36
VPREB3-202ENST00000398465 BTN2A2Q8WVV5 523 aa12.81□□□□□ -0.36
VPREB3-202ENST00000398465 PIH1D2Q8WWB5 315 aa12.81□□□□□ -0.36
VPREB3-202ENST00000398465 NUS1Q96E22 293 aa12.81□□□□□ -0.36
VPREB3-202ENST00000398465 COQ10AQ96MF6 247 aa12.81□□□□□ -0.36
VPREB3-202ENST00000398465 QKIQ96PU8 341 aaKnown RBP eCLIP12.81□□□□□ -0.36
VPREB3-202ENST00000398465 LYSMD1Q96S90 227 aa12.81□□□□□ -0.36
VPREB3-202ENST00000398465 MBNL1Q9NR56 388 aaKnown RBP12.81□□□□□ -0.36
VPREB3-202ENST00000398465 DNAJC28Q9NX36 388 aa12.81□□□□□ -0.36
VPREB3-202ENST00000398465 ZFC3H1O60293 1989 aaKnown RBP12.8□□□□□ -0.36
VPREB3-202ENST00000398465 HACD1B0YJ81 288 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 SDC3O75056 442 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 JCHAINP01591 159 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 PCCBP05166 539 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 MMP2P08253 660 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 GM2AP17900 193 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 DGKAP23743 735 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 HTR1BP28222 390 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 TEAD1P28347 426 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 CETN2P41208 172 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 EPHB1P54762 984 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 NIPAL4Q0D2K0 466 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 FOXC1Q12948 553 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 XRCC4Q13426 336 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 ARHGEF7Q14155 803 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 NFATC4Q14934 902 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 NOMO1Q15155 1222 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 PEX26Q7Z412 305 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 RNF10Q8N5U6 811 aaKnown RBP12.8□□□□□ -0.36
VPREB3-202ENST00000398465 UBL4BQ8N7F7 174 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 ZNF548Q8NEK5 533 aaPredicted RBP12.8□□□□□ -0.36
VPREB3-202ENST00000398465 OR4C6Q8NH72 309 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 LRRN4Q8WUT4 740 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 UBE2Q2Q8WVN8 375 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 ADAMTS14Q8WXS8 1223 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 DTD2Q96FN9 168 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 IMP4Q96G21 291 aaKnown RBP12.8□□□□□ -0.36
VPREB3-202ENST00000398465 VAT1Q99536 393 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 PCDH9Q9HC56 1237 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 TOR4AQ9NXH8 423 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 NLGN3Q9NZ94 848 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 WASF3Q9UPY6 502 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 PCDHGA1Q9Y5H4 931 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 CAPN6Q9Y6Q1 641 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 ACACBO00763 2458 aa12.8□□□□□ -0.36
VPREB3-202ENST00000398465 SPEGQ15772 3267 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 NEMP2A6NFY4 417 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 ENC1O14682 589 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 KRT86O43790 486 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 NRDCO43847 1150 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 LDOC1O95751 146 aaPredicted RBP12.79□□□□□ -0.36
VPREB3-202ENST00000398465 PDHA1P08559 390 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 HOXC4P09017 264 aaPredicted RBP12.79□□□□□ -0.36
VPREB3-202ENST00000398465 ALPPL2P10696 532 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 CDK4P11802 303 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 TSHRP16473 764 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 KELP23276 732 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 PTPN3P26045 913 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 CD86P42081 329 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 BLKP51451 505 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 SKOR1P84550 965 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 SEMG2Q02383 582 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 ADCY2Q08462 1091 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 BNIP3Q12983 259 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 EIF2B5Q13144 721 aaKnown RBP12.79□□□□□ -0.36
VPREB3-202ENST00000398465 IHHQ14623 411 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 ACOX1Q15067 660 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 TEX44Q53QW1 395 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 HS1BP3Q53T59 392 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 TPRG1LQ5T0D9 272 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 KDM7AQ6ZMT4 941 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 RAB44Q7Z6P3 723 aaPredicted RBP12.79□□□□□ -0.36
VPREB3-202ENST00000398465 PHACTR4Q8IZ21 702 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 EID2Q8N6I1 236 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 ALG3Q92685 438 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 TADA1Q96BN2 335 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 CNDP2Q96KP4 475 aaKnown RBP12.79□□□□□ -0.36
VPREB3-202ENST00000398465 DUSP23Q9BVJ7 150 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 ADGRE3Q9BY15 652 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 OSBPL8Q9BZF1 889 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 SLC25A51Q9H1U9 297 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 WDR26Q9H7D7 661 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 SEPT10Q9P0V9 454 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 SAE1Q9UBE0 346 aaPredicted RBP12.79□□□□□ -0.36
VPREB3-202ENST00000398465 TRIM10Q9UDY6 481 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 APOBEC3BQ9UH17 382 aaKnown RBP12.79□□□□□ -0.36
VPREB3-202ENST00000398465 AMFRQ9UKV5 643 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 NEUROG3Q9Y4Z2 214 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 ADGRG1Q9Y653 693 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 CSNK1G3Q9Y6M4 447 aa12.79□□□□□ -0.36
VPREB3-202ENST00000398465 GOLGA4Q13439 2230 aaKnown RBP12.78□□□□□ -0.36
VPREB3-202ENST00000398465 CACNB4O00305 520 aaPredicted RBP12.78□□□□□ -0.36
VPREB3-202ENST00000398465 TJP3O95049 919 aa12.78□□□□□ -0.36
VPREB3-202ENST00000398465 PRLP01236 227 aa12.78□□□□□ -0.36
VPREB3-202ENST00000398465 PYGLP06737 847 aa12.78□□□□□ -0.36
VPREB3-202ENST00000398465 ALPIP09923 528 aa12.78□□□□□ -0.36
VPREB3-202ENST00000398465 JUNDP17535 347 aa12.78□□□□□ -0.36
VPREB3-202ENST00000398465 HNF1BP35680 557 aa12.78□□□□□ -0.36
VPREB3-202ENST00000398465 TRIM23P36406 574 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms