RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 NDST1P52848 882 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 SMIM11AP58511 58 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 SNAPC1Q16533 368 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 NFE2Q16621 373 aaPredicted RBP12.36□□□□□ -0.43
SMU1-201ENST00000397149 CHCHD6Q9BRQ6 235 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 DEFB129Q9H1M3 183 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 ENY2Q9NPA8 101 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 MRTO4Q9UKD2 239 aaKnown RBP12.36□□□□□ -0.43
SMU1-201ENST00000397149 GNEQ9Y223 722 aaKnown RBP12.36□□□□□ -0.43
SMU1-201ENST00000397149 MRPS23Q9Y3D9 190 aaKnown RBP12.36□□□□□ -0.43
SMU1-201ENST00000397149 PCDHA3Q9Y5H8 950 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 PGAM1P18669 254 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 UBE2E3Q969T4 207 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 DMRTB1Q96MA1 342 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 KXD1Q9BQD3 176 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 TREM1Q9NP99 234 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 EIF3KQ9UBQ5 218 aaKnown RBP12.36□□□□□ -0.43
SMU1-201ENST00000397149 TSPAN16Q9UKR8 245 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 AP1M2Q9Y6Q5 423 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 FLT1P17948 1338 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 C1QTNF3-AMACRE9PGA6 284 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 GRIN3BO60391 1043 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 MICAL2O94851 1124 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 ETS2P15036 469 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 CCNOP22674 350 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 CTSOP43234 321 aaPredicted RBP12.36□□□□□ -0.43
SMU1-201ENST00000397149 OR3A3P47888 321 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 OR3A2P47893 321 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 GTF2A2P52657 109 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 NFIAQ12857 509 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 ZCCHC12Q6PEW1 402 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 ZNF548Q8NEK5 533 aaPredicted RBP12.36□□□□□ -0.43
SMU1-201ENST00000397149 HTR3CQ8WXA8 447 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 PTCD3Q96EY7 689 aaKnown RBP12.36□□□□□ -0.43
SMU1-201ENST00000397149 HTATIP2Q9BUP3 242 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 FBXO28Q9NVF7 368 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 PRAG1Q86YV5 1406 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 BICRAQ9NZM4 1560 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 DDX3XO00571 662 aaKnown RBP eCLIP12.36□□□□□ -0.431e-11■■■■□ 21.2
SMU1-201ENST00000397149 TULP3O75386 442 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 CCNKO75909 580 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 FOSL1P15407 271 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 PON1P27169 355 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 CDH5P33151 784 aaPredicted RBP12.36□□□□□ -0.43
SMU1-201ENST00000397149 CTNNB1P35222 781 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 CTSKP43235 329 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 ZNF792Q3KQV3 632 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 PRAMEF17Q5VTA0 474 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 AAGABQ6PD74 315 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 PLET1Q6UQ28 207 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 GALNT11Q8NCW6 608 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 AARSD1Q9BTE6 412 aaKnown RBP12.36□□□□□ -0.43
SMU1-201ENST00000397149 TAPBPLQ9BX59 468 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 MYOZ2Q9NPC6 264 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 USP20Q9Y2K6 914 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 ZMYM4Q5VZL5 1548 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 RFXANKO14593 260 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 PEX14O75381 377 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 MED24O75448 989 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 SLC6A9P48067 706 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 TNK2Q07912 1038 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 FAAP100Q0VG06 881 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 BICRALQ6AI39 1079 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 TTC27Q6P3X3 843 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 MB21D2Q8IYB1 491 aaPredicted RBP12.36□□□□□ -0.43
SMU1-201ENST00000397149 OR6K2Q8NGY2 324 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 DIRAS2Q96HU8 199 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 UGGT2Q9NYU1 1516 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 A0A087X1B8 175 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 NADKO95544 446 aaPredicted RBP12.35□□□□□ -0.43
SMU1-201ENST00000397149 SPATA31D3P0C874 917 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 CDH3P22223 829 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 RPA1P27694 616 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 S100A10P60903 97 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 SPATA31D4Q6ZUB0 917 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 ANKRD13AQ8IZ07 590 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 PTGR2Q8N8N7 351 aaPredicted RBP12.35□□□□□ -0.43
SMU1-201ENST00000397149 CHST13Q8NET6 341 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 ACTL9Q8TC94 416 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 LRRN4Q8WUT4 740 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 MFSD3Q96ES6 412 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 C8orf48Q96LL4 319 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 SLC25A23Q9BV35 468 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 NARFQ9UHQ1 456 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 SSR2P43308 183 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 SLC25A3Q00325 362 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 UBAP2Q5T6F2 1119 aaKnown RBP12.35□□□□□ -0.43
SMU1-201ENST00000397149 ZNF697Q5TEC3 545 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 RNF43Q68DV7 783 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 CDC42EP5Q6NZY7 148 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 ZFP1Q6P2D0 407 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 HSDL2Q6YN16 418 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 KDM7AQ6ZMT4 941 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 BEND5Q7L4P6 421 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 CROCCP3Q8IVE0 287 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 FBXO15Q8NCQ5 510 aaPredicted RBP12.35□□□□□ -0.43
SMU1-201ENST00000397149 SLAIN1Q8ND83 568 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 FAM110BQ8TC76 370 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 XAGE5Q8WWM1 108 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 TMBIM4Q9HC24 238 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms