RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 H0Y8X5 98 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 TLR4O00206 839 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 SMAD6O43541 496 aaKnown RBP6.23□□□□□ -1.41
PTPN20-208ENST00000395727 TNFSF14O43557 240 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 SNAP91O60641 907 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 ZNF821O75541 412 aaPredicted RBP6.23□□□□□ -1.41
PTPN20-208ENST00000395727 CD160O95971 181 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 GSRP00390 522 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 MT-CO1P00395 513 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 WNT1P04628 370 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 C1SP09871 688 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 GZMAP12544 262 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 ATP1A3P13637 1013 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 DESP17661 470 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 CDK11BP21127 795 aaKnown RBP6.23□□□□□ -1.41
PTPN20-208ENST00000395727 GPD1P21695 349 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 EPHA8P29322 1005 aaPredicted RBP6.23□□□□□ -1.41
PTPN20-208ENST00000395727 CHRNA3P32297 505 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 RFC1P35251 1148 aaPredicted RBP6.23□□□□□ -1.41
PTPN20-208ENST00000395727 ARRB1P49407 418 aaPredicted RBP6.23□□□□□ -1.41
PTPN20-208ENST00000395727 ZNF135P52742 658 aaPredicted RBP6.23□□□□□ -1.41
PTPN20-208ENST00000395727 C21orf59P57076 290 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 PPP2CBP62714 309 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 PPP2CAP67775 309 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 ARF5P84085 180 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 BNIP3Q12983 259 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 C15orf59Q2T9L4 293 aaPredicted RBP6.23□□□□□ -1.41
PTPN20-208ENST00000395727 ACCSLQ4AC99 568 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 INO80DQ53TQ3 878 aaPredicted RBP6.23□□□□□ -1.41
PTPN20-208ENST00000395727 PLEKHA7Q6IQ23 1121 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 KIAA1161Q6NSJ0 714 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 TMPRSS7Q7RTY8 843 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 KANSL1Q7Z3B3 1105 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 THAP5Q7Z6K1 395 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 TFAP2DQ7Z6R9 452 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 ADAT2Q7Z6V5 191 aaKnown RBP6.23□□□□□ -1.41
PTPN20-208ENST00000395727 MCOLN2Q8IZK6 566 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 AOPEPQ8N6M6 819 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 RTL3Q8N8U3 475 aaKnown RBP6.23□□□□□ -1.41
PTPN20-208ENST00000395727 OR7D4Q8NG98 312 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 JOSD2Q8TAC2 188 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 SLC30A5Q8TAD4 765 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 SAP25Q8TEE9 199 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 GANCQ8TET4 914 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 FNIP1Q8TF40 1166 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 FAM172AQ8WUF8 416 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 ASB12Q8WXK4 309 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 ARHGEF2Q92974 986 aaKnown RBP6.23□□□□□ -1.41
PTPN20-208ENST00000395727 RAB7BQ96AH8 199 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 VOPP1Q96AW1 172 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 TBC1D31Q96DN5 1066 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 IQCDQ96DY2 449 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 SERAC1Q96JX3 654 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 CAMK1GQ96NX5 476 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 AGPAT1Q99943 283 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 CNPY3Q9BT09 278 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 FUCA2Q9BTY2 467 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 ATP13A1Q9HD20 1204 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 GDF3Q9NR23 364 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 AIPL1Q9NZN9 384 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 MPP6Q9NZW5 540 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 IL36AQ9UHA7 158 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 SLC5A6Q9Y289 635 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 MFHAS1Q9Y4C4 1052 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 PCDHGA1Q9Y5H4 931 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 TMEM131Q92545 1883 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 SPTBN2O15020 2390 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 CHD8Q9HCK8 2581 aa6.22□□□□□ -1.41
PTPN20-208ENST00000395727 TBC1D3DA0A087WVF3 549 aa6.22□□□□□ -1.41
PTPN20-208ENST00000395727 TBC1D3IA0A087WXS9 549 aa6.22□□□□□ -1.41
PTPN20-208ENST00000395727 TBC1D3EA0A087X179 549 aa6.22□□□□□ -1.41
PTPN20-208ENST00000395727 TBC1D3KA0A087X1G2 549 aa6.22□□□□□ -1.41
PTPN20-208ENST00000395727 LOC100996750A0A140TA64 210 aa6.22□□□□□ -1.41
PTPN20-208ENST00000395727 TBC1D3FA6NER0 549 aaPredicted RBP6.22□□□□□ -1.41
PTPN20-208ENST00000395727 TBC1D3LB9A6J9 549 aa6.22□□□□□ -1.41
PTPN20-208ENST00000395727 FAM72CH0Y354 149 aa6.22□□□□□ -1.41
PTPN20-208ENST00000395727 K7ERQ8 282 aa6.22□□□□□ -1.41
PTPN20-208ENST00000395727 CBX4O00257 560 aa6.22□□□□□ -1.41
PTPN20-208ENST00000395727 KPNA3O00505 521 aaPredicted RBP6.22□□□□□ -1.41
PTPN20-208ENST00000395727 FGF10O15520 208 aaPredicted RBP6.22□□□□□ -1.41
PTPN20-208ENST00000395727 CCP110O43303 1012 aa6.22□□□□□ -1.41
PTPN20-208ENST00000395727 KDELR3O43731 214 aa6.22□□□□□ -1.41
PTPN20-208ENST00000395727 RAMP2O60895 175 aa6.22□□□□□ -1.41
PTPN20-208ENST00000395727 SRGAP2O75044 1071 aa6.22□□□□□ -1.41
PTPN20-208ENST00000395727 RTN2O75298 545 aa6.22□□□□□ -1.41
PTPN20-208ENST00000395727 CLEC3AO75596 197 aa6.22□□□□□ -1.41
PTPN20-208ENST00000395727 PLEKP08567 350 aaPredicted RBP6.22□□□□□ -1.41
PTPN20-208ENST00000395727 TBC1D3HP0C7X1 549 aa6.22□□□□□ -1.41
PTPN20-208ENST00000395727 C1QTNF9P0C862 333 aa6.22□□□□□ -1.41
PTPN20-208ENST00000395727 RRM1P23921 792 aa6.22□□□□□ -1.41
PTPN20-208ENST00000395727 RECQLP46063 649 aaPredicted RBP6.22□□□□□ -1.41
PTPN20-208ENST00000395727 SUOXP51687 545 aa6.22□□□□□ -1.41
PTPN20-208ENST00000395727 CCNHP51946 323 aaPredicted RBP6.22□□□□□ -1.41
PTPN20-208ENST00000395727 NEK3P51956 506 aa6.22□□□□□ -1.41
PTPN20-208ENST00000395727 METAP1P53582 386 aa6.22□□□□□ -1.41
PTPN20-208ENST00000395727 RNF4P78317 190 aa6.22□□□□□ -1.41
PTPN20-208ENST00000395727 ILKQ13418 452 aa6.22□□□□□ -1.41
PTPN20-208ENST00000395727 SHBQ15464 509 aa6.22□□□□□ -1.41
PTPN20-208ENST00000395727 SMAD1Q15797 465 aaKnown RBP6.22□□□□□ -1.41
PTPN20-208ENST00000395727 CDO1Q16878 200 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms