RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 GHDCQ8N2G8 530 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 HSPA12BQ96MM6 686 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 THAP2Q9H0W7 228 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 LGR6Q9HBX8 967 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 DPP3Q9NY33 737 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 NDOR1Q9UHB4 597 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 A0A0G2JMP0 313 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 HACD1B0YJ81 288 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 USP17L10C9JJH3 530 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 TBX3O15119 743 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 SLC28A2O43868 658 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 PIGNO95427 931 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 RHOAP61586 193 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 MARC1Q5VT66 337 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 KLHDC7AQ5VTJ3 777 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 SHC4Q6S5L8 630 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 C11orf65Q8NCR3 313 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 OR4M2Q8NGB6 313 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 TMEM47Q9BQJ4 181 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 PRDM16Q9HAZ2 1276 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 ENY2Q9NPA8 101 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 TRPS1Q9UHF7 1281 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 CAMSAP1Q5T5Y3 1602 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 FADS2P1A8MWK0 482 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 POLRMTO00411 1230 aaKnown RBP13.44□□□□□ -0.26
USP49-203ENST00000394253 GCATO75600 419 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 PCDH8O95206 1070 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 ATP13A4Q4VNC1 1196 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 CD300LFQ8TDQ1 290 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 SNX33Q8WV41 574 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 CHIAQ9BZP6 476 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 UCKL1Q9NWZ5 548 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 AXIN2Q9Y2T1 843 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 RPTORQ8N122 1335 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 ZNF844Q08AG5 666 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 PLEKHG4Q58EX7 1191 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 LYPLAL1Q5VWZ2 237 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 FBXO31Q5XUX0 539 aaPredicted RBP13.44□□□□□ -0.26
USP49-203ENST00000394253 USP45Q70EL2 814 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 LINGO2Q7L985 606 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 SYVN1Q86TM6 617 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 C2orf69Q8N8R5 385 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 MARCH10Q8NA82 808 aaPredicted RBP13.44□□□□□ -0.26
USP49-203ENST00000394253 SPATA22Q8NHS9 363 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 HDAC2Q92769 488 aaKnown RBP13.44□□□□□ -0.26
USP49-203ENST00000394253 COA1Q9GZY4 146 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 RGCCQ9H4X1 137 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 ACTL7BQ9Y614 415 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 USP12O75317 370 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 TMC7Q7Z402 723 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 BAP1Q92560 729 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 SPACA7Q96KW9 195 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 TOR3AQ9H497 397 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 CYP3A7-CYP3A51PA0A087WV96 503 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 CYP3A7P24462 503 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 HSD17B2P37059 387 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 IL6STP40189 918 aaPredicted RBP13.43□□□□□ -0.26
USP49-203ENST00000394253 NKX2-3Q8TAU0 364 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 SEMA3GQ9NS98 782 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 TNFSF13BQ9Y275 285 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 HIF3AQ9Y2N7 669 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 TMED5Q9Y3A6 229 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 COX4I1P13073 169 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 SLC6A4P31645 630 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 PON3Q15166 354 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 ZDHHC17Q8IUH5 632 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 DQX1Q8TE96 717 aaKnown RBP13.43□□□□□ -0.26
USP49-203ENST00000394253 ALDH8A1Q9H2A2 487 aaPredicted RBP13.43□□□□□ -0.26
USP49-203ENST00000394253 ABCB9Q9NP78 766 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 TAS2R3Q9NYW6 316 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 CKBP12277 381 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 TUBG1P23258 451 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 DCDC1P59894 354 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 CSTF1Q05048 431 aaKnown RBP13.43□□□□□ -0.26
USP49-203ENST00000394253 ZNF227Q86WZ6 799 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 WDR49Q8IV35 697 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 SLC44A3Q8N4M1 653 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 COLGALT1Q8NBJ5 622 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 FBXO25Q8TCJ0 367 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 GNG13Q9P2W3 67 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 KBTBD13C9JR72 458 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 HTR2AP28223 471 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 EMC2Q15006 297 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 ILDR2Q71H61 639 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 UNC5CLQ8IV45 518 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 CARNMT1Q8N4J0 409 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 HOPXQ9BPY8 73 aaPredicted RBP13.43□□□□□ -0.26
USP49-203ENST00000394253 KCNS3Q9BQ31 491 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 FBXO44Q9H4M3 255 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 ABCA1O95477 2261 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 FABP12A6NFH5 140 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 SLC22A1O15245 554 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 ZBTB11O95625 1053 aaPredicted RBP13.43□□□□□ -0.26
USP49-203ENST00000394253 IGFBP5P24593 272 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 CYP2F1P24903 491 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 LCN1P31025 176 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 GPSM2P81274 684 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 PPIL2Q13356 520 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 CDK10Q15131 360 aa13.43□□□□□ -0.26
USP49-203ENST00000394253 GRK1Q15835 563 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms