RNA–Protein interactions for RNA: ENST00000391827.2

NLRP3-205, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-205ENST00000391827 PRAMEF11O60813 436 aa10.84□□□□□ -0.67
NLRP3-205ENST00000391827 RAMP2O60895 175 aa10.84□□□□□ -0.67
NLRP3-205ENST00000391827 BCAS2O75934 225 aaPredicted RBP10.84□□□□□ -0.67
NLRP3-205ENST00000391827 FGF1P05230 155 aa10.84□□□□□ -0.67
NLRP3-205ENST00000391827 FDXRP22570 491 aa10.84□□□□□ -0.67
NLRP3-205ENST00000391827 OR1G1P47890 313 aa10.84□□□□□ -0.67
NLRP3-205ENST00000391827 ATP4BP51164 291 aa10.84□□□□□ -0.67
NLRP3-205ENST00000391827 PRKCZQ05513 592 aa10.84□□□□□ -0.67
NLRP3-205ENST00000391827 SMARCB1Q12824 385 aa10.84□□□□□ -0.67
NLRP3-205ENST00000391827 CEACAM7Q14002 265 aa10.84□□□□□ -0.67
NLRP3-205ENST00000391827 PTK2BQ14289 1009 aa10.84□□□□□ -0.67
NLRP3-205ENST00000391827 MBTPS1Q14703 1052 aa10.84□□□□□ -0.67
NLRP3-205ENST00000391827 POLD3Q15054 466 aaPredicted RBP10.84□□□□□ -0.67
NLRP3-205ENST00000391827 LPCAT4Q643R3 524 aa10.84□□□□□ -0.67
NLRP3-205ENST00000391827 ZNF280DQ6N043 979 aa10.84□□□□□ -0.67
NLRP3-205ENST00000391827 CUZD1Q86UP6 607 aa10.84□□□□□ -0.67
NLRP3-205ENST00000391827 FBXO32Q969P5 355 aa10.84□□□□□ -0.67
NLRP3-205ENST00000391827 PPP1R36Q96LQ0 422 aa10.84□□□□□ -0.67
NLRP3-205ENST00000391827 POLR1EQ9GZS1 481 aaKnown RBP10.84□□□□□ -0.67
NLRP3-205ENST00000391827 GSTO2Q9H4Y5 243 aa10.84□□□□□ -0.67
NLRP3-205ENST00000391827 PDFQ9HBH1 243 aa10.84□□□□□ -0.67
NLRP3-205ENST00000391827 MRPL40Q9NQ50 206 aaKnown RBP10.84□□□□□ -0.67
NLRP3-205ENST00000391827 GTSE1Q9NYZ3 720 aa10.84□□□□□ -0.67
NLRP3-205ENST00000391827 MARCH2Q9P0N8 246 aa10.84□□□□□ -0.67
NLRP3-205ENST00000391827 SUN2Q9UH99 717 aa10.84□□□□□ -0.67
NLRP3-205ENST00000391827 TMCC1O94876 653 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 ZDHHC11BP0C7U3 371 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 ME2P23368 584 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 ARSDP51689 593 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 KPNA1P52294 538 aaPredicted RBP10.83□□□□□ -0.68
NLRP3-205ENST00000391827 ITKQ08881 620 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 FLOT2Q14254 428 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 GRM2Q14416 872 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 TRIP10Q15642 601 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 ISCA2Q86U28 154 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 EFCAB3Q8N7B9 438 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 ANKRD49Q8WVL7 239 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 TOP1MTQ969P6 601 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 HDAC10Q969S8 669 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 SGF29Q96ES7 293 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 WDR37Q9Y2I8 494 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 ACOT8O14734 319 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 E2F6O75461 281 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 HNRNPLP14866 589 aaKnown RBP eCLIP10.83□□□□□ -0.68
NLRP3-205ENST00000391827 OGNP20774 298 aaKnown RBP10.83□□□□□ -0.68
NLRP3-205ENST00000391827 DPP6P42658 865 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 CLCN2P51788 898 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 CDKN2DP55273 166 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 PRAMEP78395 509 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 STX5Q13190 355 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 ART3Q13508 389 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 CTXN3Q4LDR2 81 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 RAP1GAP2Q684P5 730 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 TMEM207Q6UWW9 146 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 CATSPER1Q8NEC5 780 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 PIP4K2CQ8TBX8 421 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 ASB2Q96Q27 587 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 TBC1D30Q9Y2I9 924 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 VWA8A3KMH1 1905 aa10.83□□□□□ -0.68
NLRP3-205ENST00000391827 AP1G1O43747 822 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 RNASEH1O60930 286 aaKnown RBP10.82□□□□□ -0.68
NLRP3-205ENST00000391827 PRKAR2AP13861 404 aaKnown RBP10.82□□□□□ -0.68
NLRP3-205ENST00000391827 ZNF24P17028 368 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 XRCC1P18887 633 aaPredicted RBP10.82□□□□□ -0.68
NLRP3-205ENST00000391827 FGFR3P22607 806 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 PSMA3P25788 255 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 GJA8P48165 433 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 ACLYP53396 1101 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 AQP4P55087 323 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 C1QTNF8P60827 252 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 MED21Q13503 144 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 ZNF678Q5SXM1 525 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 PTAR1Q7Z6K3 402 aaPredicted RBP10.82□□□□□ -0.68
NLRP3-205ENST00000391827 TICAM1Q8IUC6 712 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 TTC9BQ8N6N2 239 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 HMGCLL1Q8TB92 370 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 UNKQ9C0B0 810 aaKnown RBP10.82□□□□□ -0.68
NLRP3-205ENST00000391827 ELAC1Q9H777 363 aaKnown RBP10.82□□□□□ -0.68
NLRP3-205ENST00000391827 TMEM161AQ9NX61 479 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 MARCH4Q9P2E8 410 aaPredicted RBP10.82□□□□□ -0.68
NLRP3-205ENST00000391827 SUCOQ9UBS9 1254 aaKnown RBP10.82□□□□□ -0.68
NLRP3-205ENST00000391827 CIDEBQ9UHD4 219 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 RIMS3Q9UJD0 308 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 MRPL42Q9Y6G3 142 aaKnown RBP10.82□□□□□ -0.68
NLRP3-205ENST00000391827 TRIM38O00635 465 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 PFDN1O60925 122 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 VCLP18206 1134 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 ALDH1A3P47895 512 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 TYSND1Q2T9J0 566 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 HACD2Q6Y1H2 254 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 RNF180Q86T96 592 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 ATAD1Q8NBU5 361 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 HIPK4Q8NE63 616 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 RHEBL1Q8TAI7 183 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 BRSK1Q8TDC3 778 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 RPRD1AQ96P16 312 aaPredicted RBP10.82□□□□□ -0.68
NLRP3-205ENST00000391827 FAM193BQ96PV7 902 aaPredicted RBP10.82□□□□□ -0.68
NLRP3-205ENST00000391827 TUBGCP5Q96RT8 1024 aa10.82□□□□□ -0.68
NLRP3-205ENST00000391827 MRPL1Q9BYD6 325 aaKnown RBP10.82□□□□□ -0.68
NLRP3-205ENST00000391827 TNFRSF12AQ9NP84 129 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms