RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 FAM187BQ17R55 369 aa12.76□□□□□ -0.37
DNMT3A-204ENST00000380756 ARMC12Q5T9G4 340 aa12.76□□□□□ -0.37
DNMT3A-204ENST00000380756 NCBP2-AS2Q69YL0 99 aa12.76□□□□□ -0.37
DNMT3A-204ENST00000380756 GCNT7Q6ZNI0 430 aa12.76□□□□□ -0.37
DNMT3A-204ENST00000380756 C15orf39Q6ZRI6 1047 aa12.76□□□□□ -0.37
DNMT3A-204ENST00000380756 ARHGAP36Q6ZRI8 547 aa12.76□□□□□ -0.37
DNMT3A-204ENST00000380756 CBR4Q8N4T8 237 aa12.76□□□□□ -0.37
DNMT3A-204ENST00000380756 PPP3R2Q96LZ3 170 aa12.76□□□□□ -0.37
DNMT3A-204ENST00000380756 OR52B2Q96RD2 323 aa12.76□□□□□ -0.37
DNMT3A-204ENST00000380756 C1orf21Q9H246 121 aa12.76□□□□□ -0.37
DNMT3A-204ENST00000380756 HPS4Q9NQG7 708 aa12.76□□□□□ -0.37
DNMT3A-204ENST00000380756 ARL15Q9NXU5 204 aa12.76□□□□□ -0.37
DNMT3A-204ENST00000380756 PTTG2Q9NZH5 202 aa12.76□□□□□ -0.37
DNMT3A-204ENST00000380756 SQORQ9Y6N5 450 aa12.76□□□□□ -0.37
DNMT3A-204ENST00000380756 RGS21Q2M5E4 152 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 VPS26BQ4G0F5 336 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 SLC9A4Q6AI14 798 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 OLFML1Q6UWY5 402 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 MON1AQ86VX9 555 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 OR7A2PQ8NGA2 310 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 HEXDCQ8WVB3 486 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 SELENOMQ8WWX9 145 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 PEBP4Q96S96 227 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 MLPHQ9BV36 600 aaPredicted RBP12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 RAD21L1Q9H4I0 556 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 ATAD3AQ9NVI7 634 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 SIX4Q9UIU6 781 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 FAM149AA5PLN7 773 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 ITGAXP20702 1163 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 RPL38P63173 70 aaKnown RBP12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 GALNT3Q14435 633 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 TJAP1Q5JTD0 557 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 GPR142Q7Z601 462 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 KBTBD2Q8IY47 623 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 LRTOMTQ8WZ04 291 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 AGO3Q9H9G7 860 aaKnown RBP12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 PIDD1Q9HB75 910 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 TIMMDC1Q9NPL8 285 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 SNX10Q9Y5X0 201 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 TIAM2Q8IVF5 1701 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 C9JVG2 144 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 XRCC1P18887 633 aaPredicted RBP12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 RRM2P31350 389 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 ATP5C1P36542 298 aaKnown RBP12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 ABL2P42684 1182 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 IRF9Q00978 393 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 LPIN1Q14693 890 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 ADAMTSL2Q86TH1 951 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 PHTF2Q8N3S3 785 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 CPSF7Q8N684 471 aaKnown RBP12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 EZH1Q92800 747 aaPredicted RBP12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 TPD52L3Q96J77 140 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 C6orf62Q9GZU0 229 aaPredicted RBP12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 RERGLQ9H628 205 aa12.75□□□□□ -0.37
DNMT3A-204ENST00000380756 MYBPHLA2RUH7 354 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 STAU1O95793 577 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 IFNA14P01570 189 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 MMP3P08254 477 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 LPOP22079 712 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 DGKAP23743 735 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 CRY1Q16526 586 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 TXNDC11Q6PKC3 985 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 CDHR3Q6ZTQ4 885 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 ASRGL1Q7L266 308 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 PQLC3Q8N755 202 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 NLGN2Q8NFZ4 835 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 MCOLN3Q8TDD5 553 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 GIPC3Q8TF64 312 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 TBATAQ96M53 351 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 EMILIN2Q9BXX0 1053 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 TBC1D30Q9Y2I9 924 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 NEMP2A6NFY4 417 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 HOXA2O43364 376 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 RFPL1O75677 317 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 CST1P01037 141 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 CCDC159P0C7I6 412 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 CHI3L1P36222 383 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 ZNF132P52740 706 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 PLCL1Q15111 1095 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 ZNF284Q2VY69 593 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 CAND1Q86VP6 1230 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 PCED1BQ96HM7 432 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 REEP1Q9H902 201 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 OXSMQ9NWU1 459 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 GIT1Q9Y2X7 761 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 TRIM17Q9Y577 477 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 NUP98P52948 1817 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 LAMA4Q16363 1823 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 CCL22O00626 93 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 NPHS1O60500 1241 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 USP2O75604 605 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 MED26O95402 600 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 EPB42P16452 691 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 SCNN1AP37088 669 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 BCL2L1Q07817 233 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 ACSM2AQ08AH3 577 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 TOP3AQ13472 1001 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 SYPL2Q5VXT5 272 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 ACSM2BQ68CK6 577 aa12.74□□□□□ -0.37
DNMT3A-204ENST00000380756 TAC4Q86UU9 113 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms