RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 DUOX1Q9NRD9 1551 aa10.85□□□□□ -0.67
HIF3A-205ENST00000377670 N6AMT1Q9Y5N5 214 aa10.85□□□□□ -0.67
HIF3A-205ENST00000377670 NID2Q14112 1375 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 FMO4P31512 558 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 CASP6P55212 293 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 IL2P60568 153 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 TRAF3Q13114 568 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 LYPLAL1Q5VWZ2 237 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 TMEM26Q6ZUK4 368 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 BHLHE22Q8NFJ8 381 aaPredicted RBP10.84□□□□□ -0.67
HIF3A-205ENST00000377670 RORBQ92753 470 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 GINS4Q9BRT9 223 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 FAIM2Q9BWQ8 316 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 PTPRHQ9HD43 1115 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 THAP1Q9NVV9 213 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 CROTQ9UKG9 612 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 AGO1Q9UL18 857 aaKnown RBP10.84□□□□□ -0.67
HIF3A-205ENST00000377670 CPQQ9Y646 472 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 A0A087WXM4 84 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 KRT36O76013 467 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 SERPINE1P05121 402 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 ADRA1DP25100 572 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 GPR15P49685 360 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 CYP4F8P98187 520 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 CNGA2Q16280 664 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 RGS21Q2M5E4 152 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 C9orf57Q5W0N0 161 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 ZFP1Q6P2D0 407 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 CNSTQ6PJW8 725 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 CRELD2Q6UXH1 353 aaPredicted RBP10.84□□□□□ -0.67
HIF3A-205ENST00000377670 PACS1Q6VY07 963 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 SNX32Q86XE0 403 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 KBTBD2Q8IY47 623 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 SIPA1Q96FS4 1042 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 VCPIP1Q96JH7 1222 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 BTBD9Q96Q07 612 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 DHX33Q9H6R0 707 aaKnown RBP10.84□□□□□ -0.67
HIF3A-205ENST00000377670 AVENQ9NQS1 362 aaPredicted RBP10.84□□□□□ -0.67
HIF3A-205ENST00000377670 NCKIPSDQ9NZQ3 722 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 GMIPQ9P107 970 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 MAFBQ9Y5Q3 323 aaPredicted RBP10.84□□□□□ -0.67
HIF3A-205ENST00000377670 GOLGA4Q13439 2230 aaKnown RBP10.84□□□□□ -0.67
HIF3A-205ENST00000377670 A0A1W2PQH9 124 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 TCRBV7S2A1N4TA0A589 114 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 SNX3O60493 162 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 ENTPD5O75356 428 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 CLDN11O75508 207 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 ABCB1P08183 1280 aaPredicted RBP10.84□□□□□ -0.67
HIF3A-205ENST00000377670 TPBGLP0DKB5 382 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 PKNOX1P55347 436 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 PLA2G4EQ3MJ16 856 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 FAM98BQ52LJ0 330 aaKnown RBP10.84□□□□□ -0.67
HIF3A-205ENST00000377670 TPGS2Q68CL5 300 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 CPNE8Q86YQ8 564 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 ARL10Q8N8L6 244 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 PRELID2Q8N945 189 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 ENKURQ8TC29 256 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 C2orf15Q8WU43 125 aaKnown RBP10.84□□□□□ -0.67
HIF3A-205ENST00000377670 HTR3CQ8WXA8 447 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 SNRNP25Q9BV90 132 aaKnown RBP10.84□□□□□ -0.67
HIF3A-205ENST00000377670 SLC39A8Q9C0K1 460 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 KLHL31Q9H511 634 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 ARHGAP28Q9P2N2 729 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 ADAM30Q9UKF2 790 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 ATRNL1Q5VV63 1379 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 MYH13Q9UKX3 1938 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 ARL5CA6NH57 179 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 DCXO43602 365 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 UNC5CO95185 931 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 HIST1H2ABP04908 130 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 CYP1A2P05177 515 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 ITGAVP06756 1048 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 ME2P23368 584 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 NR1D2Q14995 579 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 PDK3Q15120 406 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 ZNF57Q68EA5 555 aaPredicted RBP10.84□□□□□ -0.67
HIF3A-205ENST00000377670 HIST3H2AQ7L7L0 130 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 UTP15Q8TED0 518 aaKnown RBP10.84□□□□□ -0.67
HIF3A-205ENST00000377670 HIST1H2ACQ93077 130 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 VPS33AQ96AX1 596 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 LRRC46Q96FV0 321 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 FAM210AQ96ND0 272 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 DEPDC7Q96QD5 511 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 ERVK-5Q9HDB9 667 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 COG5Q9UP83 839 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 TELO2Q9Y4R8 837 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 PCDHA11Q9Y5I1 949 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 PEX12O00623 359 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 CES2O00748 559 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 MPOP05164 745 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 AGXTP21549 392 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 VARS2Q5ST30 1063 aaKnown RBP10.84□□□□□ -0.67
HIF3A-205ENST00000377670 TYW3Q6IPR3 259 aaKnown RBP10.84□□□□□ -0.67
HIF3A-205ENST00000377670 SVOPQ8N4V2 548 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 ANKRD52Q8NB46 1076 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 WFIKKN2Q8TEU8 576 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 PLEKHG4BQ96PX9 1271 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 CPXM1Q96SM3 734 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 BDH2Q9BUT1 245 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 C1orf50Q9BV19 199 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms