RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.29■■□□□ 1.32
C9orf47-202ENST00000375850 FOXP3Q9BZS1 431 aa23.29■■□□□ 1.32
C9orf47-202ENST00000375850 SEMA4CQ9C0C4 833 aa23.29■■□□□ 1.32
C9orf47-202ENST00000375850 FGF22Q9HCT0 170 aa23.29■■□□□ 1.32
C9orf47-202ENST00000375850 LMBRD1Q9NUN5 540 aa23.29■■□□□ 1.32
C9orf47-202ENST00000375850 LOXL2Q9Y4K0 774 aa23.29■■□□□ 1.32
C9orf47-202ENST00000375850 ASH1LQ9NR48 2969 aaKnown RBP23.28■■□□□ 1.32
C9orf47-202ENST00000375850 TMEM202A6NGA9 273 aa23.28■■□□□ 1.32
C9orf47-202ENST00000375850 TRAFD1O14545 582 aaPredicted RBP23.28■■□□□ 1.32
C9orf47-202ENST00000375850 CASC3O15234 703 aaKnown RBP23.28■■□□□ 1.32
C9orf47-202ENST00000375850 PRPSAP2O60256 369 aa23.28■■□□□ 1.32
C9orf47-202ENST00000375850 NOBOXO60393 691 aa23.28■■□□□ 1.32
C9orf47-202ENST00000375850 ATP1A3P13637 1013 aa23.28■■□□□ 1.32
C9orf47-202ENST00000375850 ERCC2P18074 760 aa23.28■■□□□ 1.32
C9orf47-202ENST00000375850 TNFAIP3P21580 790 aa23.28■■□□□ 1.32
C9orf47-202ENST00000375850 CD82P27701 267 aa23.28■■□□□ 1.32
C9orf47-202ENST00000375850 RGRP47804 291 aa23.28■■□□□ 1.32
C9orf47-202ENST00000375850 PEX6Q13608 980 aa23.28■■□□□ 1.32
C9orf47-202ENST00000375850 HLTFQ14527 1009 aaKnown RBP eCLIP23.28■■□□□ 1.32
C9orf47-202ENST00000375850 KIAA1614Q5VZ46 1190 aa23.28■■□□□ 1.32
C9orf47-202ENST00000375850 SPRED1Q7Z699 444 aa23.28■■□□□ 1.32
C9orf47-202ENST00000375850 SNRNP25Q9BV90 132 aaKnown RBP23.28■■□□□ 1.32
C9orf47-202ENST00000375850 AKAP7Q9P0M2 348 aaPredicted RBP23.28■■□□□ 1.32
C9orf47-202ENST00000375850 LRIT1Q9P2V4 623 aa23.28■■□□□ 1.32
C9orf47-202ENST00000375850 DFFAO00273 331 aa23.27■■□□□ 1.32
C9orf47-202ENST00000375850 SOCS5O75159 536 aa23.27■■□□□ 1.32
C9orf47-202ENST00000375850 ITGB2P05107 769 aa23.27■■□□□ 1.32
C9orf47-202ENST00000375850 TCEA2Q15560 299 aa23.27■■□□□ 1.32
C9orf47-202ENST00000375850 STX1AQ16623 288 aa23.27■■□□□ 1.32
C9orf47-202ENST00000375850 PNCKQ6P2M8 343 aa23.27■■□□□ 1.32
C9orf47-202ENST00000375850 IRF2BP2Q7Z5L9 587 aa23.27■■□□□ 1.32
C9orf47-202ENST00000375850 ARHGAP12Q8IWW6 846 aa23.27■■□□□ 1.32
C9orf47-202ENST00000375850 SGF29Q96ES7 293 aa23.27■■□□□ 1.32
C9orf47-202ENST00000375850 SYT11Q9BT88 431 aa23.27■■□□□ 1.32
C9orf47-202ENST00000375850 DPEP2Q9H4A9 486 aa23.27■■□□□ 1.32
C9orf47-202ENST00000375850 GPATCH2LQ9NWQ4 482 aa23.27■■□□□ 1.32
C9orf47-202ENST00000375850 PISDQ9UG56 409 aa23.27■■□□□ 1.32
C9orf47-202ENST00000375850 PRKCGP05129 697 aa23.26■■□□□ 1.31
C9orf47-202ENST00000375850 MYCLP1P12525 358 aaPredicted RBP23.26■■□□□ 1.31
C9orf47-202ENST00000375850 SCNN1BP51168 640 aa23.26■■□□□ 1.31
C9orf47-202ENST00000375850 ACOX1Q15067 660 aa23.26■■□□□ 1.31
C9orf47-202ENST00000375850 CA9Q16790 459 aa23.26■■□□□ 1.31
C9orf47-202ENST00000375850 SPECC1LQ69YQ0 1117 aa23.26■■□□□ 1.31
C9orf47-202ENST00000375850 USP53Q70EK8 1073 aa23.26■■□□□ 1.31
C9orf47-202ENST00000375850 Q8N9G6 341 aaPredicted RBP23.26■■□□□ 1.31
C9orf47-202ENST00000375850 TMEM168Q9H0V1 697 aa23.26■■□□□ 1.31
C9orf47-202ENST00000375850 ZWILCHQ9H900 591 aa23.26■■□□□ 1.31
C9orf47-202ENST00000375850 CYP4F12Q9HCS2 524 aa23.26■■□□□ 1.31
C9orf47-202ENST00000375850 PHPT1Q9NRX4 125 aaPredicted RBP23.26■■□□□ 1.31
C9orf47-202ENST00000375850 PCDHB11Q9Y5F2 797 aa23.26■■□□□ 1.31
C9orf47-202ENST00000375850 RNF215Q9Y6U7 377 aa23.26■■□□□ 1.31
C9orf47-202ENST00000375850 PRSS38A1L453 326 aa23.25■■□□□ 1.31
C9orf47-202ENST00000375850 TMEM191CA6NGB0 347 aa23.25■■□□□ 1.31
C9orf47-202ENST00000375850 GZMAP12544 262 aa23.25■■□□□ 1.31
C9orf47-202ENST00000375850 LBRQ14739 615 aaKnown RBP23.25■■□□□ 1.31
C9orf47-202ENST00000375850 PPP6R3Q5H9R7 873 aaPredicted RBP23.25■■□□□ 1.31
C9orf47-202ENST00000375850 RALGPS1Q5JS13 557 aa23.25■■□□□ 1.31
C9orf47-202ENST00000375850 TMEM164Q5U3C3 297 aa23.25■■□□□ 1.31
C9orf47-202ENST00000375850 BBS5Q8N3I7 341 aa23.25■■□□□ 1.31
C9orf47-202ENST00000375850 KCTD15Q96SI1 283 aaPredicted RBP23.25■■□□□ 1.31
C9orf47-202ENST00000375850 GSDMCQ9BYG8 508 aa23.25■■□□□ 1.31
C9orf47-202ENST00000375850 TRNAU1APQ9NX07 287 aaKnown RBP23.25■■□□□ 1.31
C9orf47-202ENST00000375850 PCSK1NQ9UHG2 260 aa23.25■■□□□ 1.31
C9orf47-202ENST00000375850 SCINQ9Y6U3 715 aa23.25■■□□□ 1.31
C9orf47-202ENST00000375850 SETXQ7Z333 2677 aaKnown RBP23.24■■□□□ 1.31
C9orf47-202ENST00000375850 A0A1W2PQC6 194 aa23.24■■□□□ 1.31
C9orf47-202ENST00000375850 B4DGG1 531 aa23.24■■□□□ 1.31
C9orf47-202ENST00000375850 HTRA2O43464 458 aaPredicted RBP23.24■■□□□ 1.31
C9orf47-202ENST00000375850 CPNE6O95741 557 aa23.24■■□□□ 1.31
C9orf47-202ENST00000375850 SFTPCP11686 197 aa23.24■■□□□ 1.31
C9orf47-202ENST00000375850 HGFP14210 728 aa23.24■■□□□ 1.31
C9orf47-202ENST00000375850 CCNB1P14635 433 aa23.24■■□□□ 1.31
C9orf47-202ENST00000375850 TEAD1P28347 426 aa23.24■■□□□ 1.31
C9orf47-202ENST00000375850 MIPP30301 263 aa23.24■■□□□ 1.31
C9orf47-202ENST00000375850 ILF3Q12906 894 aaKnown RBP eCLIP23.24■■□□□ 1.31
C9orf47-202ENST00000375850 ZNF235Q14590 738 aa23.24■■□□□ 1.31
C9orf47-202ENST00000375850 KCTD16Q68DU8 428 aa23.24■■□□□ 1.31
C9orf47-202ENST00000375850 APTXQ7Z2E3 356 aaKnown RBP23.24■■□□□ 1.31
C9orf47-202ENST00000375850 SLITRK4Q8IW52 837 aa23.24■■□□□ 1.31
C9orf47-202ENST00000375850 ZSCAN1Q8NBB4 408 aa23.24■■□□□ 1.31
C9orf47-202ENST00000375850 GPBAR1Q8TDU6 330 aa23.24■■□□□ 1.31
C9orf47-202ENST00000375850 NUS1Q96E22 293 aa23.24■■□□□ 1.31
C9orf47-202ENST00000375850 COQ10AQ96MF6 247 aa23.24■■□□□ 1.31
C9orf47-202ENST00000375850 MRPL40Q9NQ50 206 aaKnown RBP23.24■■□□□ 1.31
C9orf47-202ENST00000375850 TAS2R14Q9NYV8 317 aa23.24■■□□□ 1.31
C9orf47-202ENST00000375850 B4GALT6Q9UBX8 382 aa23.24■■□□□ 1.31
C9orf47-202ENST00000375850 MOSPD1Q9UJG1 213 aa23.24■■□□□ 1.31
C9orf47-202ENST00000375850 PSMD11O00231 422 aa23.23■■□□□ 1.31
C9orf47-202ENST00000375850 EFSO43281 561 aa23.23■■□□□ 1.31
C9orf47-202ENST00000375850 CYP2A6P11509 494 aaPredicted RBP23.23■■□□□ 1.31
C9orf47-202ENST00000375850 GM2AP17900 193 aa23.23■■□□□ 1.31
C9orf47-202ENST00000375850 NR1D2Q14995 579 aa23.23■■□□□ 1.31
C9orf47-202ENST00000375850 MAP9Q49MG5 647 aa23.23■■□□□ 1.31
C9orf47-202ENST00000375850 NYAP1Q6ZVC0 841 aa23.23■■□□□ 1.31
C9orf47-202ENST00000375850 ZNF438Q7Z4V0 828 aa23.23■■□□□ 1.31
C9orf47-202ENST00000375850 PIM3Q86V86 326 aa23.23■■□□□ 1.31
C9orf47-202ENST00000375850 C17orf82Q86X59 251 aaPredicted RBP23.23■■□□□ 1.31
C9orf47-202ENST00000375850 ARFGAP1Q8N6T3 406 aa23.23■■□□□ 1.31
C9orf47-202ENST00000375850 NPWQ8N729 165 aa23.23■■□□□ 1.31
C9orf47-202ENST00000375850 TRIM11Q96F44 468 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms