RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 TBL1YQ9BQ87 522 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 FICDQ9BVA6 458 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 LRRC40Q9H9A6 602 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 EBF2Q9HAK2 575 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 MAGEE1Q9HCI5 957 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 RAB6BQ9NRW1 208 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 KCTD5Q9NXV2 234 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 RAPGEFL1Q9UHV5 662 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 MYO15AQ9UKN7 3530 aa11.4□□□□□ -0.58
HSPG2-202ENST00000374676 PLXNA2O75051 1894 aa11.4□□□□□ -0.59
HSPG2-202ENST00000374676 FRYLO94915 3013 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 NPIPB15A6NHN6 443 aaPredicted RBP11.39□□□□□ -0.59
HSPG2-202ENST00000374676 ZNF500O60304 480 aaPredicted RBP11.39□□□□□ -0.59
HSPG2-202ENST00000374676 TM7SF2O76062 418 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 SUN1O94901 812 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 RETP07949 1114 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 ALPIP09923 528 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 ELFN1P0C7U0 828 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 C6P13671 934 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 LHCGRP22888 699 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 ITPKAP23677 461 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 MAT2AP31153 395 aaKnown RBP11.39□□□□□ -0.59
HSPG2-202ENST00000374676 PTGIRP43119 386 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 SEMG2Q02383 582 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 CKAP4Q07065 602 aaKnown RBP11.39□□□□□ -0.59
HSPG2-202ENST00000374676 SGCGQ13326 291 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 ARHGEF7Q14155 803 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 GALNT3Q14435 633 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 CNGA3Q16281 694 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 LPAL2Q16609 132 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 FAXCQ5TGI0 409 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 NAPEPLDQ6IQ20 393 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 DENND5AQ6IQ26 1287 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 SYDE1Q6ZW31 735 aaPredicted RBP11.39□□□□□ -0.59
HSPG2-202ENST00000374676 ARMCX6Q7L4S7 300 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 CYP2U1Q7Z449 544 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 LINC00523Q86TU6 105 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 SYT12Q8IV01 421 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 RGL4Q8IZJ4 473 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 PDCD7Q8N8D1 485 aaKnown RBP11.39□□□□□ -0.59
HSPG2-202ENST00000374676 DENND6BQ8NEG7 585 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 SMIM14Q96QK8 99 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 WRAP53Q9BUR4 548 aaKnown RBP11.39□□□□□ -0.59
HSPG2-202ENST00000374676 FSD1LQ9BXM9 530 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 TRABDQ9H4I3 376 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 EIF2B3Q9NR50 452 aaKnown RBP11.39□□□□□ -0.59
HSPG2-202ENST00000374676 HACD3Q9P035 362 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 SUSD2Q9UGT4 822 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 EIF2B4Q9UI10 523 aaKnown RBP11.39□□□□□ -0.59
HSPG2-202ENST00000374676 PILRBQ9UKJ0 227 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 HS3ST3A1Q9Y663 406 aa11.39□□□□□ -0.59
HSPG2-202ENST00000374676 RGSL1A5PLK6 1076 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 E7EVH7 732 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 PRAMEF26H0Y7S4 382 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 SLC31A1O15431 190 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 LZTS3O60299 673 aaPredicted RBP11.38□□□□□ -0.59
HSPG2-202ENST00000374676 PAK4O96013 591 aaPredicted RBP11.38□□□□□ -0.59
HSPG2-202ENST00000374676 GM2AP17900 193 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 TPSB2P20231 275 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 HNRNPA2B1P22626 353 aaKnown RBP11.38□□□□□ -0.59
HSPG2-202ENST00000374676 MAOBP27338 520 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 DEKP35659 375 aaKnown RBP11.38□□□□□ -0.59
HSPG2-202ENST00000374676 MAGEA6P43360 314 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 CHRNA4P43681 627 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 STC1P52823 247 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 RACK1P63244 317 aaKnown RBP11.38□□□□□ -0.59
HSPG2-202ENST00000374676 CDK16Q00536 496 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 PTSQ03393 145 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 GPS1Q13098 491 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 MSLNQ13421 630 aaPredicted RBP11.38□□□□□ -0.59
HSPG2-202ENST00000374676 PTK6Q13882 451 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 DHX34Q14147 1143 aaKnown RBP11.38□□□□□ -0.59
HSPG2-202ENST00000374676 FGL2Q14314 439 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 SPARCL1Q14515 664 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 PTPRRQ15256 657 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 TRIP13Q15645 432 aaPredicted RBP11.38□□□□□ -0.59
HSPG2-202ENST00000374676 TPSAB1Q15661 275 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 LRRC66Q68CR7 880 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 TMC3Q7Z5M5 1100 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 TECPR1Q7Z6L1 1165 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 RABEPKQ7Z6M1 372 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 TSPAN33Q86UF1 283 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 NLRP8Q86W28 1048 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 KLHL7Q8IXQ5 586 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 TAB3Q8N5C8 712 aaPredicted RBP11.38□□□□□ -0.59
HSPG2-202ENST00000374676 SLC25A41Q8N5S1 370 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 CEP76Q8TAP6 659 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 FAM174AQ8TBP5 190 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 CCHCR1Q8TD31 782 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 SNX19Q92543 992 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 PIGKQ92643 395 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 KLK6Q92876 244 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 COQ10AQ96MF6 247 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 C1QTNF7Q9BXJ2 289 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 TMEM74BQ9NUR3 256 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 GMEB2Q9UKD1 530 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 MRFAP1Q9Y605 127 aa11.38□□□□□ -0.59
HSPG2-202ENST00000374676 C1orf232A0A0U1RR37 186 aa11.37□□□□□ -0.59
HSPG2-202ENST00000374676 A0A1B0GTW7 788 aa11.37□□□□□ -0.59
HSPG2-202ENST00000374676 A8MX80 341 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms