RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 ZNF711Q9Y462 761 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 SPO11Q9Y5K1 396 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 ARL5AQ9Y689 179 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 IKBKGQ9Y6K9 419 aa12.35□□□□□ -0.43
TUBE1-202ENST00000368662 FAM159BA6NKW6 160 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 SHISA7A6NL88 538 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 RASGRF2O14827 1237 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 RNF40O75150 1001 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 CDH16O75309 829 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 KLF8O95600 359 aaPredicted RBP12.34□□□□□ -0.43
TUBE1-202ENST00000368662 PRKCGP05129 697 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 ALPIP09923 528 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 HOXB2P14652 356 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 CTPS1P17812 591 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 ACVR1Q04771 509 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 MGAT5Q09328 741 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 LRRC32Q14392 662 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 CNGA3Q16281 694 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 KBTBD12Q3ZCT8 623 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 EOGTQ5NDL2 527 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 ESRP1Q6NXG1 681 aaKnown RBP12.34□□□□□ -0.43
TUBE1-202ENST00000368662 KCNMB4Q86W47 210 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 LMNTD2Q8IXW0 634 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 RIBC1Q8N443 379 aaPredicted RBP12.34□□□□□ -0.43
TUBE1-202ENST00000368662 TXNDC5Q8NBS9 432 aaKnown RBP12.34□□□□□ -0.43
TUBE1-202ENST00000368662 OR13J1Q8NGT2 312 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 OR2T3Q8NH03 318 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 NELL2Q99435 816 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 ZDHHC4Q9NPG8 344 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 C20orf96Q9NUD7 363 aaPredicted RBP12.34□□□□□ -0.43
TUBE1-202ENST00000368662 NLE1Q9NVX2 485 aaPredicted RBP12.34□□□□□ -0.43
TUBE1-202ENST00000368662 NSMCE4AQ9NXX6 385 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 ZFATQ9P243 1243 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 CA14Q9ULX7 337 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 PKP3Q9Y446 797 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 TCF20Q9UGU0 1960 aaKnown RBP12.34□□□□□ -0.43
TUBE1-202ENST00000368662 C1orf232A0A0U1RR37 186 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 STX7O15400 261 aaKnown RBP12.34□□□□□ -0.43
TUBE1-202ENST00000368662 SLC7A4O43246 635 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 MYZAPP0CAP1 466 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 ZNF30P17039 623 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 PSMA3P25788 255 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 WASP42768 502 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 ZNF140P52738 457 aaPredicted RBP12.34□□□□□ -0.43
TUBE1-202ENST00000368662 PRAMEP78395 509 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 RASA2Q15283 850 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 KRT71Q3SY84 523 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 TRMT10BQ6PF06 316 aaKnown RBP12.34□□□□□ -0.43
TUBE1-202ENST00000368662 TTC7BQ86TV6 843 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 TDRPQ86YL5 185 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 MMAAQ8IVH4 418 aaKnown RBP12.34□□□□□ -0.43
TUBE1-202ENST00000368662 CALML6Q8TD86 181 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 RAB7BQ96AH8 199 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 ASB2Q96Q27 587 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 HDAC8Q9BY41 377 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 SARDHQ9UL12 918 aa12.34□□□□□ -0.43
TUBE1-202ENST00000368662 NDRG2Q9UN36 371 aaKnown RBP12.34□□□□□ -0.43
TUBE1-202ENST00000368662 CKAP5Q14008 2032 aa12.33□□□□□ -0.43
TUBE1-202ENST00000368662 ANTXRLA6NF34 631 aa12.33□□□□□ -0.44
TUBE1-202ENST00000368662 RPP40O75818 363 aaKnown RBP12.33□□□□□ -0.44
TUBE1-202ENST00000368662 VAPBO95292 243 aa12.33□□□□□ -0.44
TUBE1-202ENST00000368662 C1QAP02745 245 aa12.33□□□□□ -0.44
TUBE1-202ENST00000368662 TIMP2P16035 220 aa12.33□□□□□ -0.44
TUBE1-202ENST00000368662 MSH2P43246 934 aa12.33□□□□□ -0.44
TUBE1-202ENST00000368662 ARCN1P48444 511 aaKnown RBP12.33□□□□□ -0.44
TUBE1-202ENST00000368662 NEK3P51956 506 aa12.33□□□□□ -0.44
TUBE1-202ENST00000368662 STARD6P59095 220 aa12.33□□□□□ -0.44
TUBE1-202ENST00000368662 SATB1Q01826 763 aa12.33□□□□□ -0.44
TUBE1-202ENST00000368662 ELP6Q0PNE2 266 aa12.33□□□□□ -0.44
TUBE1-202ENST00000368662 THOC5Q13769 683 aaKnown RBP12.33□□□□□ -0.44
TUBE1-202ENST00000368662 ARHGEF7Q14155 803 aa12.33□□□□□ -0.44
TUBE1-202ENST00000368662 HSP90B2PQ58FF3 399 aa12.33□□□□□ -0.44
TUBE1-202ENST00000368662 ZNF776Q68DI1 518 aaPredicted RBP12.33□□□□□ -0.44
TUBE1-202ENST00000368662 FBXL19Q6PCT2 694 aa12.33□□□□□ -0.44
TUBE1-202ENST00000368662 PARS2Q7L3T8 475 aaKnown RBP12.33□□□□□ -0.44
TUBE1-202ENST00000368662 CTAGE3PQ8IX95 158 aa12.33□□□□□ -0.44
TUBE1-202ENST00000368662 TTC30BQ8N4P2 665 aa12.33□□□□□ -0.44
TUBE1-202ENST00000368662 RPLP0P6Q8NHW5 317 aa12.33□□□□□ -0.44
TUBE1-202ENST00000368662 PAFAH2Q99487 392 aa12.33□□□□□ -0.44
TUBE1-202ENST00000368662 FAM167BQ9BTA0 163 aa12.33□□□□□ -0.44
TUBE1-202ENST00000368662 MED4Q9NPJ6 270 aa12.33□□□□□ -0.44
TUBE1-202ENST00000368662 SLC2A6Q9UGQ3 507 aa12.33□□□□□ -0.44
TUBE1-202ENST00000368662 SCML1Q9UN30 329 aa12.33□□□□□ -0.44
TUBE1-202ENST00000368662 KANSL1LA0AUZ9 987 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 CCDC78A2IDD5 438 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 NPIPB15A6NHN6 443 aaPredicted RBP12.32□□□□□ -0.44
TUBE1-202ENST00000368662 POC1B-GALNT4F8VUJ3 575 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 AGPSO00116 658 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 AURKAO14965 403 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 ADAM23O75077 832 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 INHBAP08476 426 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 BMP1P13497 986 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 C5AR1P21730 350 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 CD72P21854 359 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 VIPR1P32241 457 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 PSMD8P48556 350 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 PTPN5P54829 565 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 ZBTB16Q05516 673 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 SFSWAPQ12872 951 aaKnown RBP12.32□□□□□ -0.44
TUBE1-202ENST00000368662 CST6Q15828 149 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms