RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 NIFKQ9BYG3 293 aaKnown RBP8.67□□□□□ -1.02
SYNE1-206ENST00000367253 ZDHHC6Q9H6R6 413 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 POLD4Q9HCU8 107 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 PCDHGA11Q9Y5H2 935 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 FAM208AQ9UK61 1670 aaKnown RBP8.67□□□□□ -1.02
SYNE1-206ENST00000367253 GPR37L1O60883 481 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 DGKIO75912 1065 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 THRAP10827 490 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 MYL2P10916 166 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 UGT1A1P22309 533 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 NDUFS1P28331 727 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 CD52P31358 61 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 SPIDRQ14159 915 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 ZSWIM7Q19AV6 140 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 ITPRIPL2Q3MIP1 535 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 GALNT13Q8IUC8 556 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 LRRC34Q8IZ02 419 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 PTPRN2Q92932 1015 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 TLR7Q9NYK1 1049 aaKnown RBP8.67□□□□□ -1.02
SYNE1-206ENST00000367253 ERVK-19Q9WJR5 959 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 HEBP2Q9Y5Z4 205 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 ZFP37Q9Y6Q3 630 aaPredicted RBP8.67□□□□□ -1.02
SYNE1-206ENST00000367253 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.67□□□□□ -1.02
SYNE1-206ENST00000367253 A0A087X0T9 212 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 A0A1W2PRQ8 180 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 TUBAL3A6NHL2 446 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 SGCEO43556 437 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 AKAP8O43823 692 aaKnown RBP8.67□□□□□ -1.02
SYNE1-206ENST00000367253 MT-ND5P03915 603 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 MMP1P03956 469 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 ME2P23368 584 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 TTKP33981 857 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 STAT5AP42229 794 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 CXCL12P48061 93 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 TRAF3Q13114 568 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 TUSC3Q13454 348 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 WASHC2DQ5SRD0 308 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 TPGS2Q68CL5 300 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 RNF43Q68DV7 783 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 LGI2Q8N0V4 545 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 PGLYRP2Q96PD5 576 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 VPS35Q96QK1 796 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 LHX5Q9H2C1 402 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 RERGLQ9H628 205 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 EFCAB1Q9HAE3 211 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 HMGXB4Q9UGU5 601 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 HAO1Q9UJM8 370 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 GRID1Q9ULK0 1009 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 PRKAB1Q9Y478 270 aa8.67□□□□□ -1.02
SYNE1-206ENST00000367253 COL14A1Q05707 1796 aaKnown RBP8.66□□□□□ -1.02
SYNE1-206ENST00000367253 WASHC1A8K0Z3 465 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 WASH3PC4AMC7 463 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 DNAJB6O75190 326 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 NOL4O94818 638 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 CALB2P22676 271 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 MAPK3P27361 379 aaPredicted RBP8.66□□□□□ -1.02
SYNE1-206ENST00000367253 S100GP29377 79 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 CYP2C18P33260 490 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 ZNF200P98182 395 aaPredicted RBP8.66□□□□□ -1.02
SYNE1-206ENST00000367253 SPATS1Q496A3 300 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 ATXN7L2Q5T6C5 722 aaPredicted RBP8.66□□□□□ -1.02
SYNE1-206ENST00000367253 MZT2BQ6NZ67 158 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 WASH2PQ6VEQ5 465 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 ANKMY2Q8IV38 441 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 CELF5Q8N6W0 485 aaKnown RBP8.66□□□□□ -1.02
SYNE1-206ENST00000367253 OR8H1Q8NGG4 311 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 ZFP28Q8NHY6 868 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 COX4I2Q96KJ9 171 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 PDCD2LQ9BRP1 358 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 LRRC4BQ9NT99 713 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 CHKBQ9Y259 395 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 TRIM49BA6NDI0 452 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 TRIM49D1C9J1S8 452 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 WWP2O00308 870 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 MSH4O15457 936 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 TSPAN3O60637 253 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 SNRPAP09012 282 aaKnown RBP8.66□□□□□ -1.02
SYNE1-206ENST00000367253 HOXD11P31277 338 aaPredicted RBP8.66□□□□□ -1.02
SYNE1-206ENST00000367253 CD79BP40259 229 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 MAGEA10P43363 369 aaPredicted RBP8.66□□□□□ -1.02
SYNE1-206ENST00000367253 AVPR1BP47901 424 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 SLC16A1P53985 500 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 NEDD8Q15843 81 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 CARTPTQ16568 116 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 AMHR2Q16671 573 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 EGFLAMQ63HQ2 1017 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 BNC2Q6ZN30 1099 aaPredicted RBP8.66□□□□□ -1.02
SYNE1-206ENST00000367253 HNRNPABQ99729 332 aaKnown RBP8.66□□□□□ -1.02
SYNE1-206ENST00000367253 FRMD8Q9BZ67 464 aaPredicted RBP8.66□□□□□ -1.02
SYNE1-206ENST00000367253 NGBQ9NPG2 151 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 IGSF9Q9P2J2 1179 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 B4GALT7Q9UBV7 327 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 COPS7AQ9UBW8 275 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 PCDHB2Q9Y5E7 798 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 LMO7Q8WWI1 1683 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 TTC26A0AVF1 554 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 FAM221BA6H8Z2 402 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 ACOT7O00154 380 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 SNAP29O95721 258 aa8.66□□□□□ -1.02
SYNE1-206ENST00000367253 ARL3P36405 182 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms