RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 CYP2C18P33260 490 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 SLC26A3P40879 764 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 SLC9A3P48764 834 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 POLD2P49005 469 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 ARCQ7LC44 396 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 KYQ8NBH2 561 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 C7orf57Q8NEG2 295 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 OR6F1Q8NGZ6 308 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 HERVK_113Q902F9 699 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 SLC39A13Q96H72 371 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 CHID1Q9BWS9 393 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 C1QTNF7Q9BXJ2 289 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 C8orf4Q9NR00 106 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 TJP2Q9UDY2 1190 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 DNMT3LQ9UJW3 386 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 GJD2Q9UKL4 321 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 PTCH2Q9Y6C5 1203 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 C12orf71A8MTZ7 269 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 ATP6V1G2-DDX39BF2Z307 99 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 BCAS1O75363 584 aaPredicted RBP11.9□□□□□ -0.5
RTN3-203ENST00000341307 DBTP11182 482 aaKnown RBP11.9□□□□□ -0.5
RTN3-203ENST00000341307 TCF4P15884 667 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 PIK3R1P27986 724 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 CD40LGP29965 261 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 ARRB2P32121 409 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 SERPINB5P36952 375 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 ALDH7A1P49419 539 aaKnown RBP11.9□□□□□ -0.5
RTN3-203ENST00000341307 VASPP50552 380 aaPredicted RBP11.9□□□□□ -0.5
RTN3-203ENST00000341307 AP2S1P53680 142 aaPredicted RBP11.9□□□□□ -0.5
RTN3-203ENST00000341307 SURF1Q15526 300 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 MBLAC2Q68D91 279 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 CAND1Q86VP6 1230 aaKnown RBP11.9□□□□□ -0.5
RTN3-203ENST00000341307 WDTC1Q8N5D0 677 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 FKBP10Q96AY3 582 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 DEPDC7Q96QD5 511 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 TWNKQ96RR1 684 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 SORT1Q99523 831 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 ADI1Q9BV57 179 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 LHPPQ9H008 270 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 POLMQ9NP87 494 aaPredicted RBP11.9□□□□□ -0.5
RTN3-203ENST00000341307 KLHL11Q9NVR0 708 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 WDR70Q9NW82 654 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.9□□□□□ -0.5
RTN3-203ENST00000341307 ZNF221Q9UK13 617 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 HES2Q9Y543 173 aa11.9□□□□□ -0.5
RTN3-203ENST00000341307 SLC15A5A6NIM6 579 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 PIK3R2O00459 728 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 SLC9A3R1O14745 358 aaPredicted RBP11.89□□□□□ -0.51
RTN3-203ENST00000341307 TLR3O15455 904 aaKnown RBP11.89□□□□□ -0.51
RTN3-203ENST00000341307 MAN1A2O60476 641 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 CD19P15391 556 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 JUNBP17275 347 aaPredicted RBP11.89□□□□□ -0.51
RTN3-203ENST00000341307 TCN1P20061 433 aaPredicted RBP11.89□□□□□ -0.51
RTN3-203ENST00000341307 SLC1A6P48664 564 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 NME5P56597 212 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 TAS2R40P59535 323 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 MRPS15P82914 257 aaKnown RBP11.89□□□□□ -0.51
RTN3-203ENST00000341307 BEX3Q00994 111 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 MMRN1Q13201 1228 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 PPP1R3AQ16821 1122 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 AASDHQ4L235 1098 aaPredicted RBP11.89□□□□□ -0.51
RTN3-203ENST00000341307 Q5BKY6 102 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 XAF1Q6GPH4 301 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 DCUN1D2Q6PH85 259 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 MFSD2AQ8NA29 543 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 CPT1BQ92523 772 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 CFAP36Q96G28 342 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 TOE1Q96GM8 510 aaKnown RBP11.89□□□□□ -0.51
RTN3-203ENST00000341307 FBXL20Q96IG2 436 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 UHRF1Q96T88 793 aaPredicted RBP11.89□□□□□ -0.51
RTN3-203ENST00000341307 OSMRQ99650 979 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 SCPEP1Q9HB40 452 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 AP3M1Q9Y2T2 418 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 CAB39Q9Y376 341 aaPredicted RBP11.89□□□□□ -0.51
RTN3-203ENST00000341307 A0A1W2PQ72 361 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 TCRBV7S3A2A0A539 114 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 TK2O00142 265 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 DEAF1O75398 565 aaPredicted RBP11.89□□□□□ -0.51
RTN3-203ENST00000341307 ZNF254O75437 659 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 C1QAP02745 245 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 FGF3P11487 239 aaPredicted RBP11.89□□□□□ -0.51
RTN3-203ENST00000341307 FCGRTP55899 365 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 SMARCB1Q12824 385 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 GNA13Q14344 377 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 FAM187BQ17R55 369 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 SLC36A3Q495N2 470 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 MORN1Q5T089 497 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 TTC39BQ5VTQ0 682 aaPredicted RBP11.89□□□□□ -0.51
RTN3-203ENST00000341307 SHEQ5VZ18 495 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 SLC16A12Q6ZSM3 486 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 DPH6Q7L8W6 267 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 TLK2Q86UE8 772 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 PHF13Q86YI8 300 aaPredicted RBP11.89□□□□□ -0.51
RTN3-203ENST00000341307 LACC1Q8IV20 430 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 GALNT12Q8IXK2 581 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 PLPP6Q8IY26 295 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 LGI2Q8N0V4 545 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 TMEM35BQ8NCS4 154 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 VPS37AQ8NEZ2 397 aa11.89□□□□□ -0.51
RTN3-203ENST00000341307 MARK4Q96L34 752 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms