RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 CCDC70Q6NSX1 233 aa19.25■□□□□ 0.67
SYNE4-202ENST00000340477 B4GALNT4Q76KP1 1039 aa19.25■□□□□ 0.67
SYNE4-202ENST00000340477 PARGQ86W56 976 aa19.25■□□□□ 0.67
SYNE4-202ENST00000340477 TP53I13Q8NBR0 393 aaPredicted RBP19.25■□□□□ 0.67
SYNE4-202ENST00000340477 ATL2Q8NHH9 583 aa19.25■□□□□ 0.67
SYNE4-202ENST00000340477 ACTL9Q8TC94 416 aa19.25■□□□□ 0.67
SYNE4-202ENST00000340477 RHBDD1Q8TEB9 315 aa19.25■□□□□ 0.67
SYNE4-202ENST00000340477 IFT43Q96FT9 208 aa19.25■□□□□ 0.67
SYNE4-202ENST00000340477 HES6Q96HZ4 224 aa19.25■□□□□ 0.67
SYNE4-202ENST00000340477 BMFQ96LC9 184 aa19.25■□□□□ 0.67
SYNE4-202ENST00000340477 MCCC1Q96RQ3 725 aaPredicted RBP19.25■□□□□ 0.67
SYNE4-202ENST00000340477 CDC6Q99741 560 aa19.25■□□□□ 0.67
SYNE4-202ENST00000340477 GLOD4Q9HC38 313 aa19.25■□□□□ 0.67
SYNE4-202ENST00000340477 DNAJC28Q9NX36 388 aa19.25■□□□□ 0.67
SYNE4-202ENST00000340477 CHKBQ9Y259 395 aa19.25■□□□□ 0.67
SYNE4-202ENST00000340477 DNAH14Q0VDD8 3507 aa19.25■□□□□ 0.67
SYNE4-202ENST00000340477 CACNA1AO00555 2505 aa19.24■□□□□ 0.67
SYNE4-202ENST00000340477 CABIN1Q9Y6J0 2220 aa19.24■□□□□ 0.67
SYNE4-202ENST00000340477 A0A0J9YYE9 177 aa19.24■□□□□ 0.67
SYNE4-202ENST00000340477 FZD6O60353 706 aa19.24■□□□□ 0.67
SYNE4-202ENST00000340477 RECQL5O94762 991 aaPredicted RBP19.24■□□□□ 0.67
SYNE4-202ENST00000340477 HEXIM1O94992 359 aaKnown RBP19.24■□□□□ 0.67
SYNE4-202ENST00000340477 TRBC1P01850 177 aa19.24■□□□□ 0.67
SYNE4-202ENST00000340477 PCCBP05166 539 aa19.24■□□□□ 0.67
SYNE4-202ENST00000340477 ZNF30P17039 623 aa19.24■□□□□ 0.67
SYNE4-202ENST00000340477 HTR1BP28222 390 aa19.24■□□□□ 0.67
SYNE4-202ENST00000340477 EIF3EP60228 445 aaKnown RBP19.24■□□□□ 0.67
SYNE4-202ENST00000340477 SKOR1P84550 965 aa19.24■□□□□ 0.67
SYNE4-202ENST00000340477 MTM1Q13496 603 aa19.24■□□□□ 0.67
SYNE4-202ENST00000340477 CNGA3Q16281 694 aa19.24■□□□□ 0.67
SYNE4-202ENST00000340477 SLC22A18ASQ8N1D0 253 aa19.24■□□□□ 0.67
SYNE4-202ENST00000340477 CNTD1Q8N815 330 aa19.24■□□□□ 0.67
SYNE4-202ENST00000340477 PIH1D2Q8WWB5 315 aa19.24■□□□□ 0.67
SYNE4-202ENST00000340477 NUS1Q96E22 293 aa19.24■□□□□ 0.67
SYNE4-202ENST00000340477 IMP4Q96G21 291 aaKnown RBP19.24■□□□□ 0.67
SYNE4-202ENST00000340477 TEKT5Q96M29 485 aa19.24■□□□□ 0.67
SYNE4-202ENST00000340477 RBM15Q96T37 977 aaKnown RBP eCLIP19.24■□□□□ 0.67
SYNE4-202ENST00000340477 TRHDEQ9UKU6 1024 aa19.24■□□□□ 0.67
SYNE4-202ENST00000340477 PPP2R2CQ9Y2T4 447 aa19.24■□□□□ 0.67
SYNE4-202ENST00000340477 PPIL1Q9Y3C6 166 aa19.24■□□□□ 0.67
SYNE4-202ENST00000340477 SPTY2D1-AS1A0A0U1RR47 76 aa19.23■□□□□ 0.67
SYNE4-202ENST00000340477 CAPN8A6NHC0 703 aa19.23■□□□□ 0.67
SYNE4-202ENST00000340477 NPIPB15A6NHN6 443 aaPredicted RBP19.23■□□□□ 0.67
SYNE4-202ENST00000340477 DDX3YO15523 660 aaKnown RBP19.23■□□□□ 0.67
SYNE4-202ENST00000340477 PDHA1P08559 390 aa19.23■□□□□ 0.67
SYNE4-202ENST00000340477 PFN3P60673 137 aa19.23■□□□□ 0.67
SYNE4-202ENST00000340477 HNRNPKP61978 463 aaKnown RBP eCLIP19.23■□□□□ 0.67
SYNE4-202ENST00000340477 RPS6KA1Q15418 735 aa19.23■□□□□ 0.67
SYNE4-202ENST00000340477 WSCD2Q2TBF2 565 aa19.23■□□□□ 0.67
SYNE4-202ENST00000340477 ITPRIPL1Q6GPH6 555 aa19.23■□□□□ 0.67
SYNE4-202ENST00000340477 DARS2Q6PI48 645 aaKnown RBP19.23■□□□□ 0.67
SYNE4-202ENST00000340477 TRIM58Q8NG06 486 aa19.23■□□□□ 0.67
SYNE4-202ENST00000340477 MBNL1Q9NR56 388 aaKnown RBP19.23■□□□□ 0.67
SYNE4-202ENST00000340477 GPR27Q9NS67 375 aa19.23■□□□□ 0.67
SYNE4-202ENST00000340477 PCOLCE2Q9UKZ9 415 aa19.23■□□□□ 0.67
SYNE4-202ENST00000340477 DCHS1Q96JQ0 3298 aa19.22■□□□□ 0.67
SYNE4-202ENST00000340477 CACNB4O00305 520 aaPredicted RBP19.22■□□□□ 0.67
SYNE4-202ENST00000340477 MMP2P08253 660 aa19.22■□□□□ 0.67
SYNE4-202ENST00000340477 ALPIP09923 528 aa19.22■□□□□ 0.67
SYNE4-202ENST00000340477 RBP3P10745 1247 aa19.22■□□□□ 0.67
SYNE4-202ENST00000340477 HNF1BP35680 557 aa19.22■□□□□ 0.67
SYNE4-202ENST00000340477 SIM1P81133 766 aaPredicted RBP19.22■□□□□ 0.67
SYNE4-202ENST00000340477 TRIP6Q15654 476 aaKnown RBP19.22■□□□□ 0.67
SYNE4-202ENST00000340477 PCSK7Q16549 785 aa19.22■□□□□ 0.67
SYNE4-202ENST00000340477 LRRC66Q68CR7 880 aa19.22■□□□□ 0.67
SYNE4-202ENST00000340477 AADACL2Q6P093 401 aa19.22■□□□□ 0.67
SYNE4-202ENST00000340477 MACC1Q6ZN28 852 aa19.22■□□□□ 0.67
SYNE4-202ENST00000340477 PID1Q7Z2X4 250 aa19.22■□□□□ 0.67
SYNE4-202ENST00000340477 GATAD2AQ86YP4 633 aa19.22■□□□□ 0.67
SYNE4-202ENST00000340477 SAP25Q8TEE9 199 aa19.22■□□□□ 0.67
SYNE4-202ENST00000340477 BTN2A2Q8WVV5 523 aa19.22■□□□□ 0.67
SYNE4-202ENST00000340477 MLPHQ9BV36 600 aaPredicted RBP19.22■□□□□ 0.67
SYNE4-202ENST00000340477 FTSJ1Q9UET6 329 aa19.22■□□□□ 0.67
SYNE4-202ENST00000340477 RSPH14Q9UHP6 348 aa19.22■□□□□ 0.67
SYNE4-202ENST00000340477 GOLGA6CA6NDK9 693 aa19.21■□□□□ 0.67
SYNE4-202ENST00000340477 GOLGA6BA6NDN3 693 aa19.21■□□□□ 0.67
SYNE4-202ENST00000340477 GIPC1O14908 333 aa19.21■□□□□ 0.67
SYNE4-202ENST00000340477 GOLGA6DP0CG33 693 aa19.21■□□□□ 0.67
SYNE4-202ENST00000340477 ALPPL2P10696 532 aa19.21■□□□□ 0.67
SYNE4-202ENST00000340477 NFKB1P19838 968 aa19.21■□□□□ 0.67
SYNE4-202ENST00000340477 LHCGRP22888 699 aa19.21■□□□□ 0.67
SYNE4-202ENST00000340477 KELP23276 732 aa19.21■□□□□ 0.67
SYNE4-202ENST00000340477 RBL1P28749 1068 aa19.21■□□□□ 0.67
SYNE4-202ENST00000340477 CDK18Q07002 472 aa19.21■□□□□ 0.67
SYNE4-202ENST00000340477 WASHC5Q12768 1159 aa19.21■□□□□ 0.67
SYNE4-202ENST00000340477 FZD2Q14332 565 aa19.21■□□□□ 0.67
SYNE4-202ENST00000340477 INPP5AQ14642 412 aa19.21■□□□□ 0.67
SYNE4-202ENST00000340477 DBX2Q6ZNG2 339 aa19.21■□□□□ 0.67
SYNE4-202ENST00000340477 CCHCR1Q8TD31 782 aa19.21■□□□□ 0.67
SYNE4-202ENST00000340477 DTD2Q96FN9 168 aa19.21■□□□□ 0.67
SYNE4-202ENST00000340477 COQ10AQ96MF6 247 aa19.21■□□□□ 0.67
SYNE4-202ENST00000340477 CAMK1GQ96NX5 476 aa19.21■□□□□ 0.67
SYNE4-202ENST00000340477 PPP1R2P1Q96PQ5 205 aa19.21■□□□□ 0.67
SYNE4-202ENST00000340477 SRPK1Q96SB4 655 aaKnown RBP19.21■□□□□ 0.67
SYNE4-202ENST00000340477 HERPUD2Q9BSE4 406 aa19.21■□□□□ 0.67
SYNE4-202ENST00000340477 WDR26Q9H7D7 661 aa19.21■□□□□ 0.67
SYNE4-202ENST00000340477 GOLGA6AQ9NYA3 693 aa19.21■□□□□ 0.67
SYNE4-202ENST00000340477 FAM153AQ9UHL3 310 aa19.21■□□□□ 0.67
SYNE4-202ENST00000340477 C1orf232A0A0U1RR37 186 aa19.2■□□□□ 0.66
SYNE4-202ENST00000340477 NEMP2A6NFY4 417 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms