RNA–Protein interactions for RNA: ENST00000337665.8

ARHGEF1-201, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-201ENST00000337665 NPAS2Q99743 824 aa14.46□□□□□ -0.1
ARHGEF1-201ENST00000337665 POLR1EQ9GZS1 481 aaKnown RBP14.46□□□□□ -0.1
ARHGEF1-201ENST00000337665 RNF186Q9NXI6 227 aa14.46□□□□□ -0.1
ARHGEF1-201ENST00000337665 BCAS2O75934 225 aaPredicted RBP14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 UBTFL6P0CB48 400 aaPredicted RBP14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 CD1DP15813 335 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 HLA-DPA1P20036 260 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 OR1E1P30953 314 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 GPR17Q13304 367 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 LRRC36Q1X8D7 754 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 RNF19BQ6ZMZ0 732 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 PQLC1Q8N2U9 271 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 TBATAQ96M53 351 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 FAM193BQ96PV7 902 aaPredicted RBP14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 TRMOQ9BU70 441 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 MRGBPQ9NV56 204 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 PDP2Q9P2J9 529 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 PCDHGA7Q9Y5G6 932 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 ARL5AQ9Y689 179 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 STX16-NPEPL1H3BU86 382 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 GOT2P00505 430 aaKnown RBP14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 FGF1P05230 155 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 HMBSP08397 361 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 TACR2P21452 398 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 PKNOX1P55347 436 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 PRAMEP78395 509 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 SQLEQ14534 574 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 UGT3A2Q3SY77 523 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 UNC50Q53HI1 259 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 GK5Q6ZS86 529 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 PHF21BQ96EK2 531 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 ZNF599Q96NL3 588 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 CASD1Q96PB1 797 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 ALG9Q9H6U8 611 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 CCSER2Q9H7U1 834 aa14.45□□□□□ -0.1
ARHGEF1-201ENST00000337665 CCDC189A1A4V9 331 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 CD3EAPO15446 510 aaKnown RBP14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 ENO3P13929 434 aaPredicted RBP14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 ME2P23368 584 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 LAMB3Q13751 1172 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 LRP8Q14114 963 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 TRIP10Q15642 601 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 PPP1R3AQ16821 1122 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 RNF220Q5VTB9 566 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 ZFP1Q6P2D0 407 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 BRSK1Q8TDC3 778 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 DNAJC1Q96KC8 554 aaKnown RBP14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 NSMCE3Q96MG7 304 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 ELAC1Q9H777 363 aaKnown RBP14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 POPDC3Q9HBV1 291 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 RIMS3Q9UJD0 308 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 TBC1D30Q9Y2I9 924 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 TRAF6Q9Y4K3 522 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 FBP2O00757 339 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 ALDH1A3P47895 512 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 PLK1P53350 603 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 ART3Q13508 389 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 GRM2Q14416 872 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 PTPRCAPQ14761 206 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 LARP4Q71RC2 724 aaKnown RBP eCLIP14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 TICAM1Q8IUC6 712 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 BTBD9Q96Q07 612 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 CCDC162PA2VCL2 907 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 RPP40O75818 363 aaKnown RBP14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 VCLP18206 1134 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 PSMA3P25788 255 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 HOXD9P28356 352 aaPredicted RBP14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 SLC6A4P31645 630 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 HERVK_113P63132 956 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 MTA1Q13330 715 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 FLOT2Q14254 428 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 C8orf82Q6P1X6 216 aaPredicted RBP14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 ZNF354CQ86Y25 554 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 USP13Q92995 863 aaPredicted RBP14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 ERVK-6Q9BXR3 956 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 CRYL1Q9Y2S2 319 aa14.44□□□□□ -0.1
ARHGEF1-201ENST00000337665 GLP2RO95838 553 aa14.43□□□□□ -0.1
ARHGEF1-201ENST00000337665 HOXB8P17481 243 aaPredicted RBP14.43□□□□□ -0.1
ARHGEF1-201ENST00000337665 GPNMBQ14956 572 aa14.43□□□□□ -0.1
ARHGEF1-201ENST00000337665 TYSND1Q2T9J0 566 aa14.43□□□□□ -0.1
ARHGEF1-201ENST00000337665 FAM219BQ5XKK7 198 aa14.43□□□□□ -0.1
ARHGEF1-201ENST00000337665 AFAP1L2Q8N4X5 818 aa14.43□□□□□ -0.1
ARHGEF1-201ENST00000337665 DDX50Q9BQ39 737 aaKnown RBP14.43□□□□□ -0.1
ARHGEF1-201ENST00000337665 MGME1Q9BQP7 344 aa14.43□□□□□ -0.1
ARHGEF1-201ENST00000337665 TRPC7Q9HCX4 862 aa14.43□□□□□ -0.1
ARHGEF1-201ENST00000337665 PRSS51A0A1B0GVH4 220 aa14.43□□□□□ -0.1
ARHGEF1-201ENST00000337665 H3BNC9 293 aa14.43□□□□□ -0.1
ARHGEF1-201ENST00000337665 UBDO15205 165 aa14.43□□□□□ -0.1
ARHGEF1-201ENST00000337665 OGNP20774 298 aaKnown RBP14.43□□□□□ -0.1
ARHGEF1-201ENST00000337665 ATP4BP51164 291 aa14.43□□□□□ -0.1
ARHGEF1-201ENST00000337665 KCNQ1P51787 676 aa14.43□□□□□ -0.1
ARHGEF1-201ENST00000337665 KPNA1P52294 538 aaPredicted RBP14.43□□□□□ -0.1
ARHGEF1-201ENST00000337665 BHLHE22Q8NFJ8 381 aaPredicted RBP14.43□□□□□ -0.1
ARHGEF1-201ENST00000337665 OR52K2Q8NGK3 314 aa14.43□□□□□ -0.1
ARHGEF1-201ENST00000337665 TRAPPC9Q96Q05 1148 aa14.43□□□□□ -0.1
ARHGEF1-201ENST00000337665 TTLL2Q9BWV7 592 aa14.43□□□□□ -0.1
ARHGEF1-201ENST00000337665 PPP1R12CQ9BZL4 782 aa14.43□□□□□ -0.1
ARHGEF1-201ENST00000337665 YIPF3Q9GZM5 350 aa14.43□□□□□ -0.1
ARHGEF1-201ENST00000337665 RETREG1Q9H6L5 497 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms