RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 C2orf73Q8N5S3 287 aaPredicted RBP7.93□□□□□ -1.14
CIITA-201ENST00000324288 NELL1Q92832 810 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 SMARCD1Q96GM5 515 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 GPATCH1Q9BRR8 931 aaKnown RBP7.93□□□□□ -1.14
CIITA-201ENST00000324288 GBA2Q9HCG7 927 aaPredicted RBP7.93□□□□□ -1.14
CIITA-201ENST00000324288 TAS2R13Q9NYV9 303 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 STARD13Q9Y3M8 1113 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 OR14I1A6ND48 311 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 UNC5CO95185 931 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 MIPP30301 263 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 CDH17Q12864 832 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 TBX2Q13207 712 aaPredicted RBP7.92□□□□□ -1.14
CIITA-201ENST00000324288 NEPROQ6NW34 567 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 TNS4Q8IZW8 715 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 EIF3KQ9UBQ5 218 aaKnown RBP7.92□□□□□ -1.14
CIITA-201ENST00000324288 LEF1Q9UJU2 399 aaPredicted RBP7.92□□□□□ -1.14
CIITA-201ENST00000324288 SCN3AQ9NY46 2000 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 MYO3AQ8NEV4 1616 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 A0A087X1B8 175 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 FAM149AA5PLN7 773 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 H3BMM5 538 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 S100A2P29034 98 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 DLG2Q15700 870 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 C1orf189Q5VU69 101 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 HHIPL2Q6UWX4 724 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 ADGRG2Q8IZP9 1017 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 PNPT1Q8TCS8 783 aaKnown RBP7.92□□□□□ -1.14
CIITA-201ENST00000324288 CSGALNACT1Q8TDX6 532 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 S100PBPQ96BU1 408 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 EHD1Q9H4M9 534 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 THG1LQ9NWX6 298 aaKnown RBP7.92□□□□□ -1.14
CIITA-201ENST00000324288 POLR3HQ9Y535 204 aaPredicted RBP7.92□□□□□ -1.14
CIITA-201ENST00000324288 PCDHB5Q9Y5E4 795 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 RPTORQ8N122 1335 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 RENBPP51606 427 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 TNK2Q07912 1038 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 SMCO1Q147U7 214 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 C15orf59Q2T9L4 293 aaPredicted RBP7.92□□□□□ -1.14
CIITA-201ENST00000324288 SBK1Q52WX2 424 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 HYIQ5T013 277 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 SDHAF4Q5VUM1 108 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 NAT16Q8N8M0 369 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 TDRD1Q9BXT4 1180 aaKnown RBP7.92□□□□□ -1.14
CIITA-201ENST00000324288 PSMD13Q9UNM6 376 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 TBC1D3BA6NDS4 549 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 SLC26A4O43511 780 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 UGT1A9O60656 530 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 ENTPD3O75355 529 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 AMD1P17707 334 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 UGT1A6P19224 532 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 UGT1A1P22309 533 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 UGT1A4P22310 534 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 UGT1A3P35503 534 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 UGT1A5P35504 534 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 THOP1P52888 689 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 DLG4P78352 724 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 KCNT2Q6UVM3 1135 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 SPPL2CQ8IUH8 684 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 CCDC36Q8IYA8 594 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 SYTL5Q8TDW5 730 aaPredicted RBP7.92□□□□□ -1.14
CIITA-201ENST00000324288 KAT5Q92993 513 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 RAD51AP1Q96B01 352 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 ZCCHC2Q9C0B9 1178 aaKnown RBP7.92□□□□□ -1.14
CIITA-201ENST00000324288 TKTL2Q9H0I9 626 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 UGT1A7Q9HAW7 530 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 UGT1A10Q9HAW8 530 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 UGT1A8Q9HAW9 530 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 CIDEBQ9UHD4 219 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 BARX2Q9UMQ3 279 aaPredicted RBP7.92□□□□□ -1.14
CIITA-201ENST00000324288 TISP43B9A030 160 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 FAM155BO75949 473 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 CCNE2O96020 404 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 ATP5F1P24539 256 aaPredicted RBP7.92□□□□□ -1.14
CIITA-201ENST00000324288 ICAM3P32942 547 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 MAGEA12P43365 314 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 RXRGP48443 463 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 CDH15P55291 814 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 ECT2LQ008S8 904 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 BTG3Q14201 252 aaPredicted RBP7.92□□□□□ -1.14
CIITA-201ENST00000324288 GNA13Q14344 377 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 PPM1LQ5SGD2 360 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 CDK5RAP1Q96SZ6 601 aaKnown RBP7.92□□□□□ -1.14
CIITA-201ENST00000324288 RGS17Q9UGC6 210 aaPredicted RBP7.92□□□□□ -1.14
CIITA-201ENST00000324288 OR2B6P58173 313 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 RPH3AQ9Y2J0 694 aaPredicted RBP7.92□□□□□ -1.14
CIITA-201ENST00000324288 CDC42BPAQ5VT25 1732 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 GTPBP1O00178 669 aaKnown RBP7.92□□□□□ -1.14
CIITA-201ENST00000324288 CST1P01037 141 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 ZNF7P17097 686 aaPredicted RBP7.92□□□□□ -1.14
CIITA-201ENST00000324288 RBL1P28749 1068 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 C1QBPQ07021 282 aaKnown RBP7.92□□□□□ -1.14
CIITA-201ENST00000324288 MPPE1Q53F39 396 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 TRPV1Q8NER1 839 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 GRHL1Q9NZI5 618 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 WRBO00258 174 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 INSRRP14616 1297 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 PRKAA2P54646 552 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 ST3GAL1Q11201 340 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 NAE1Q13564 534 aa7.92□□□□□ -1.14
CIITA-201ENST00000324288 KCNA10Q16322 511 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms