RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 CCDC25Q86WR0 208 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 PHF13Q86YI8 300 aaPredicted RBP5.01□□□□□ -1.61
CKS1B-201ENST00000308987 GPD1LQ8N335 351 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 MCPH1Q8NEM0 835 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 C1orf54Q8WWF1 131 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 SEMA4DQ92854 862 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 KAT5Q92993 513 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 C18orf25Q96B23 403 aaPredicted RBP5.01□□□□□ -1.61
CKS1B-201ENST00000308987 RTKNQ9BST9 563 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 OSBPL8Q9BZF1 889 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 IKZF4Q9H2S9 585 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 PCIF1Q9H4Z3 704 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 LMAN1LQ9HAT1 526 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 PTPRHQ9HD43 1115 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 KCNK9Q9NPC2 374 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 SAR1AQ9NR31 198 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 PRMT7Q9NVM4 692 aaPredicted RBP5.01□□□□□ -1.61
CKS1B-201ENST00000308987 POLR3BQ9NW08 1133 aaPredicted RBP5.01□□□□□ -1.61
CKS1B-201ENST00000308987 DDX56Q9NY93 547 aaKnown RBP5.01□□□□□ -1.61
CKS1B-201ENST00000308987 GDE1Q9NZC3 331 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 ANAPC7Q9UJX3 599 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 SUFUQ9UMX1 484 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 AGAP1Q9UPQ3 857 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 SHOC2Q9UQ13 582 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 NAALADL1Q9UQQ1 740 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.01□□□□□ -1.61
CKS1B-201ENST00000308987 TNFRSF18Q9Y5U5 241 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 STYXL1Q9Y6J8 313 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 ATMQ13315 3056 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 PLXNB3Q9ULL4 1909 aa5.01□□□□□ -1.61
CKS1B-201ENST00000308987 CFAP46Q8IYW2 2715 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5□□□□□ -1.61
CKS1B-201ENST00000308987 SMIM23A6NLE4 172 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 C22orf46C9J442 243 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 RASA4BC9J798 803 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 ACKR2O00590 384 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 SLC16A4O15374 487 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 RASA4O43374 803 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 EXTL3O43909 919 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 EDF1O60869 148 aaKnown RBP5□□□□□ -1.61
CKS1B-201ENST00000308987 ATP2C2O75185 946 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 FAM155BO75949 473 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 B3GAT3O94766 335 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 TJP3O95049 919 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 ZWINTO95229 277 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 ACSL3O95573 720 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 LSM8O95777 96 aaKnown RBP5□□□□□ -1.61
CKS1B-201ENST00000308987 LDHAP00338 332 aaKnown RBP5□□□□□ -1.61
CKS1B-201ENST00000308987 PIGRP01833 764 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 CALB1P05937 261 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 ATP5BP06576 529 aaKnown RBP5□□□□□ -1.61
CKS1B-201ENST00000308987 ITGAVP06756 1048 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 RETP07949 1114 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 DLATP10515 647 aaKnown RBP5□□□□□ -1.61
CKS1B-201ENST00000308987 PTPN2P17706 415 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 CALRP27797 417 aaKnown RBP5□□□□□ -1.61
CKS1B-201ENST00000308987 GDI1P31150 447 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 CHKAP35790 457 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 SLCO1A2P46721 670 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 NPTX2P47972 431 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 AP3M2P53677 418 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 EPHA5P54756 1037 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 ITGA1P56199 1179 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 PEX3P56589 373 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 KCNJ2P63252 427 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 ELAVL2Q12926 359 aaKnown RBP5□□□□□ -1.61
CKS1B-201ENST00000308987 MYO1EQ12965 1108 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 DMP1Q13316 513 aaPredicted RBP5□□□□□ -1.61
CKS1B-201ENST00000308987 FOXE3Q13461 319 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 E2F5Q15329 346 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 SF3A2Q15428 464 aaKnown RBP5□□□□□ -1.61
CKS1B-201ENST00000308987 CCDC6Q16204 474 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 ZACNQ401N2 412 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 IZUMO3Q5VZ72 239 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 FAM91A1Q658Y4 838 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 IGFL4Q6B9Z1 124 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 LAIR1Q6GTX8 287 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 TMC8Q8IU68 726 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 CBWD2Q8IUF1 395 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 TCEAL8Q8IYN2 117 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 HACE1Q8IYU2 909 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 FITM2Q8N6M3 262 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 ENDOVQ8N8Q3 282 aaKnown RBP5□□□□□ -1.61
CKS1B-201ENST00000308987 ZNF461Q8TAF7 563 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 TAS1R2Q8TE23 839 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 AGAP11Q8TF27 550 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 NSMCE1Q8WV22 266 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 DNASE1L2Q92874 299 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 SMARCD2Q92925 531 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 MBD6Q96DN6 1003 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 STAMBPL1Q96FJ0 436 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 ZFYVE19Q96K21 471 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 ZBTB45Q96K62 511 aaPredicted RBP5□□□□□ -1.61
CKS1B-201ENST00000308987 NELL2Q99435 816 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 FAM126AQ9BYI3 521 aaPredicted RBP5□□□□□ -1.61
CKS1B-201ENST00000308987 PITPNM3Q9BZ71 974 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 ZNF518BQ9C0D4 1074 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 CDT1Q9H211 546 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 BRD9Q9H8M2 597 aa5□□□□□ -1.61
CKS1B-201ENST00000308987 TRPV4Q9HBA0 871 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms