RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 PCDHB5Q9Y5E4 795 aa10.38□□□□□ -0.75
APOBEC3F-201ENST00000308521 UNC80Q8N2C7 3258 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 SLCO1B7G3V0H7 640 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 VNN2O95498 520 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 FGFR3P22607 806 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 SLC5A2P31639 672 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 GLUD2P49448 558 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 CDKL1Q00532 357 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 CEACAM7Q14002 265 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 MRPL58Q14197 206 aaKnown RBP10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 LSM12Q3MHD2 195 aaKnown RBP10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 IYDQ6PHW0 289 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 NLRC5Q86WI3 1866 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 CNTD1Q8N815 330 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 PDCD6IPQ8WUM4 868 aaKnown RBP10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 TTPALQ9BTX7 342 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 GATA5Q9BWX5 397 aaPredicted RBP10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 MRPL1Q9BYD6 325 aaKnown RBP10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 OXSMQ9NWU1 459 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 FBXW11Q9UKB1 542 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 APPL1Q9UKG1 709 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 ZNF701M0R085 212 aaPredicted RBP10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 EEF2KO00418 725 aaKnown RBP10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 ACOT8O14734 319 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 MFSD11O43934 449 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 CLASP2O75122 1294 aaKnown RBP10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 TPPPO94811 219 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 ESRRBO95718 433 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 ERVK-10P10266 1014 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 HSPA8P11142 646 aaKnown RBP10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 ATP6V1B1P15313 513 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 CDH2P19022 906 aaPredicted RBP10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 OR1D2P34982 312 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 CDK9P50750 372 aaKnown RBP10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 RPL14P50914 215 aaKnown RBP10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 TXNL4AP83876 142 aaKnown RBP10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 MS4A2Q01362 244 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 KCNC4Q03721 635 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 C6orf52Q5T4I8 152 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 SEL1L3Q68CR1 1132 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 CHERPQ8IWX8 916 aaKnown RBP10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 CCNYQ8ND76 341 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 DDHD1Q8NEL9 900 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 ANKK1Q8NFD2 765 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 BHLHE22Q8NFJ8 381 aaPredicted RBP10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 BORCS5Q969J3 196 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 IL22Q9GZX6 179 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 CCDC68Q9H2F9 335 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 CWH43Q9H720 699 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 EFCAB1Q9HAE3 211 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 GMIPQ9P107 970 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 IGSF9Q9P2J2 1179 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 OR12D3Q9UGF7 316 aa10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 FNDC1Q4ZHG4 1894 aaPredicted RBP10.37□□□□□ -0.75
APOBEC3F-201ENST00000308521 A0A096LPK6 155 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 MTMR11A4FU01 709 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 HOXA2O43364 376 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 ZNF23P17027 643 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 ZNF26P17031 533 aaPredicted RBP10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 PSMC3P17980 439 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 DNAJB2P25686 324 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 HADHAP40939 763 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 ALDH3B2P48448 385 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 PSMD8P48556 350 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 CSE1LP55060 971 aaKnown RBP10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 C1QTNF8P60827 252 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 NAA20P61599 178 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 GK3PQ14409 553 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 TGFBIQ15582 683 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 NFE2Q16621 373 aaPredicted RBP10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 SMUG1Q53HV7 270 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 PPM1LQ5SGD2 360 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 KIAA1841Q6NSI8 718 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 CNKSR3Q6P9H4 555 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 CMC1Q7Z7K0 106 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 TNS4Q8IZW8 715 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 FBXO22Q8NEZ5 403 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 RCN3Q96D15 328 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 MRPL9Q9BYD2 267 aaKnown RBP10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 LRRC40Q9H9A6 602 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 WDR41Q9HAD4 459 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 CLK4Q9HAZ1 481 aaKnown RBP10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 NMRAL1Q9HBL8 299 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 MRPL40Q9NQ50 206 aaKnown RBP10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 SEPT10Q9P0V9 454 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 RSL24D1Q9UHA3 163 aaKnown RBP10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 ANKRD6Q9Y2G4 727 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 TDRKHQ9Y2W6 561 aaKnown RBP10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 PTPRDP23468 1912 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 MICAL3Q7RTP6 2002 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 H3BSA7 217 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 RNF103O00237 685 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 GRID2O43424 1007 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 CNOT3O75175 753 aaKnown RBP10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 OXSR1O95747 527 aaPredicted RBP10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 HMBSP08397 361 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 ERCC2P18074 760 aa10.36□□□□□ -0.75
APOBEC3F-201ENST00000308521 PRKAA1Q13131 559 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms