RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 RABIFP47224 123 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 CDK18Q07002 472 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 SNX1Q13596 522 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 LRRC14Q15048 493 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 CNGA3Q16281 694 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 P3H1Q32P28 736 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 FAM182AQ5T1J6 154 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 LIPIQ6XZB0 460 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 GCNT7Q6ZNI0 430 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 KDELC2Q7Z4H8 507 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 OXR1Q8N573 874 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 MINDY1Q8N5J2 469 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 CCDC89Q8N998 374 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 FAM71DQ8N9W8 422 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 TMEM145Q8NBT3 493 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 IPMKQ8NFU5 416 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 CCHCR1Q8TD31 782 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 NUS1Q96E22 293 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 MCCC1Q96RQ3 725 aaPredicted RBP11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 NAPGQ99747 312 aaPredicted RBP11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 C1QTNF2Q9BXJ5 285 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 GDF3Q9NR23 364 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 SNX12Q9UMY4 172 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 CA5BQ9Y2D0 317 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 PPIL1Q9Y3C6 166 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 SLCO1B1Q9Y6L6 691 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 DMDP11532 3685 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 LRP4O75096 1905 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 GPR179Q6PRD1 2367 aa11.03□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 ZNF106Q9H2Y7 1883 aaKnown RBP11.02□□□□□ -0.64
CSPG4P1Y-201ENST00000306641 C1orf232A0A0U1RR37 186 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 A0A1W2PR77 199 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 CTAGE9A4FU28 777 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 C5orf60A6NFR6 353 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ANKRD66B4E2M5 251 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 H0Y8X5 98 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 CES2O00748 559 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 TOR1BO14657 336 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 DFNA5O60443 496 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 RECQL5O94762 991 aaPredicted RBP11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 HEXIM1O94992 359 aaKnown RBP11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 NDST3O95803 873 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 IFNB1P01574 187 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ITGAVP06756 1048 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 THEGLP0DJG4 465 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 HLA-DPA1P20036 260 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 STIP1P31948 543 aaKnown RBP11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 HNF1BP35680 557 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 IGFALSP35858 605 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 WNT3AP56704 352 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 CLDN2P57739 230 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 FGL2Q14314 439 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 IRF4Q15306 451 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 CCNG2Q16589 344 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 QPCTQ16769 361 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 KIF19Q2TAC6 998 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 UAP1L1Q3KQV9 507 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 LRRC66Q68CR7 880 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 GSTA5Q7RTV2 222 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 DCP2Q8IU60 420 aaKnown RBP11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 RASGEF1CQ8N431 466 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 SRPK1Q96SB4 655 aaKnown RBP11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 GAREM1Q9H706 876 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 USP29Q9HBJ7 922 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 SNX11Q9Y5W9 270 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 HS3ST3A1Q9Y663 406 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 VPS13AQ96RL7 3174 aa11.02□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 TLR4O00206 839 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 WNT9AO14904 365 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 RAD51BO15315 384 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 YKT6O15498 198 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 GDF9O60383 454 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 GCATO75600 419 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PRLP01236 227 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 SLC4A1P02730 911 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 WNT1P04628 370 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 FGF1P05230 155 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 LHCGRP22888 699 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 LMAN1P49257 510 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 CCT8P50990 548 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 THOP1P52888 689 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 LIMK1P53667 647 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 GDF10P55107 478 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 NXPH1P58417 271 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PTK2BQ14289 1009 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 AGERQ15109 404 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 SIX1Q15475 284 aaPredicted RBP11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 OASLQ15646 514 aaKnown RBP11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 PARP6Q2NL67 630 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 STPG1Q5TH74 334 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 CRTC1Q6UUV9 634 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 KDELC1Q6UW63 502 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 Q6ZSR6 202 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 ABI3BPQ7Z7G0 1075 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 TSPAN33Q86UF1 283 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 SLC25A41Q8N5S1 370 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 TP53I13Q8NBR0 393 aaPredicted RBP11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 OR13H1Q8NG92 308 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 TADA1Q96BN2 335 aa11.01□□□□□ -0.65
CSPG4P1Y-201ENST00000306641 DTD2Q96FN9 168 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms