RNA–Protein interactions for RNA: ENST00000296255.7

RPN1-201, Transcript of ribophorin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPN1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-201ENST00000296255 SLC29A1Q99808 456 aa16.7■□□□□ 0.26
RPN1-201ENST00000296255 SLC25A23Q9BV35 468 aa16.7■□□□□ 0.26
RPN1-201ENST00000296255 TANC1Q9C0D5 1861 aa16.7■□□□□ 0.26
RPN1-201ENST00000296255 TRPA1O75762 1119 aa16.7■□□□□ 0.26
RPN1-201ENST00000296255 PAPSS2O95340 614 aaPredicted RBP16.7■□□□□ 0.26
RPN1-201ENST00000296255 ALDOCP09972 364 aaKnown RBP16.7■□□□□ 0.26
RPN1-201ENST00000296255 NRG1Q02297 640 aaPredicted RBP16.7■□□□□ 0.26
RPN1-201ENST00000296255 SPRYD7Q5W111 196 aa16.7■□□□□ 0.26
RPN1-201ENST00000296255 FAM45BPQ6NSW5 357 aa16.7■□□□□ 0.26
RPN1-201ENST00000296255 ZNF683Q8IZ20 524 aa16.7■□□□□ 0.26
RPN1-201ENST00000296255 UMODL1-AS1Q8N2C9 162 aa16.7■□□□□ 0.26
RPN1-201ENST00000296255 OR6P1Q8NGX9 317 aa16.7■□□□□ 0.26
RPN1-201ENST00000296255 FAM110BQ8TC76 370 aa16.7■□□□□ 0.26
RPN1-201ENST00000296255 FAM45AQ8TCE6 357 aa16.7■□□□□ 0.26
RPN1-201ENST00000296255 DUS3LQ96G46 650 aaKnown RBP16.7■□□□□ 0.26
RPN1-201ENST00000296255 UHRF1Q96T88 793 aaPredicted RBP16.7■□□□□ 0.26
RPN1-201ENST00000296255 MRGBPQ9NV56 204 aa16.7■□□□□ 0.26
RPN1-201ENST00000296255 CROTQ9UKG9 612 aa16.7■□□□□ 0.26
RPN1-201ENST00000296255 Q9Y3F1 56 aa16.7■□□□□ 0.26
RPN1-201ENST00000296255 MYO16Q9Y6X6 1858 aa16.69■□□□□ 0.26
RPN1-201ENST00000296255 H0YJX3 145 aa16.69■□□□□ 0.26
RPN1-201ENST00000296255 SLC7A4O43246 635 aa16.69■□□□□ 0.26
RPN1-201ENST00000296255 CNTN5O94779 1100 aa16.69■□□□□ 0.26
RPN1-201ENST00000296255 SUPT7LO94864 414 aa16.69■□□□□ 0.26
RPN1-201ENST00000296255 OR4Q2P0C623 313 aa16.69■□□□□ 0.26
RPN1-201ENST00000296255 SLC7A1P30825 629 aa16.69■□□□□ 0.26
RPN1-201ENST00000296255 RENBPP51606 427 aa16.69■□□□□ 0.26
RPN1-201ENST00000296255 SIRPB2Q5JXA9 342 aa16.69■□□□□ 0.26
RPN1-201ENST00000296255 B3GNT6Q6ZMB0 384 aa16.69■□□□□ 0.26
RPN1-201ENST00000296255 GALNT7Q86SF2 657 aa16.69■□□□□ 0.26
RPN1-201ENST00000296255 RETREG3Q86VR2 466 aa16.69■□□□□ 0.26
RPN1-201ENST00000296255 MFSD1Q9H3U5 465 aa16.69■□□□□ 0.26
RPN1-201ENST00000296255 POLR3BQ9NW08 1133 aaPredicted RBP16.69■□□□□ 0.26
RPN1-201ENST00000296255 CNOT6Q9ULM6 557 aaKnown RBP16.69■□□□□ 0.26
RPN1-201ENST00000296255 SNX13Q9Y5W8 968 aa16.69■□□□□ 0.26
RPN1-201ENST00000296255 TDRD15B5MCY1 1934 aaKnown RBP16.69■□□□□ 0.26
RPN1-201ENST00000296255 PPP6CO00743 305 aa16.69■□□□□ 0.26
RPN1-201ENST00000296255 PSMC3P17980 439 aa16.69■□□□□ 0.26
RPN1-201ENST00000296255 GPX3P22352 226 aa16.69■□□□□ 0.26
RPN1-201ENST00000296255 SLC7A2P52569 658 aa16.69■□□□□ 0.26
RPN1-201ENST00000296255 CDH13P55290 713 aa16.69■□□□□ 0.26
RPN1-201ENST00000296255 TIAL1Q01085 375 aaKnown RBP eCLIP16.69■□□□□ 0.262e-6■■■■□ 24.3
RPN1-201ENST00000296255 ALFQ53S48 1182 aa16.69■□□□□ 0.26
RPN1-201ENST00000296255 SPATA2LQ8IUW3 424 aaPredicted RBP16.69■□□□□ 0.26
RPN1-201ENST00000296255 PABPC5Q96DU9 382 aaKnown RBP16.69■□□□□ 0.26
RPN1-201ENST00000296255 LRCH3Q96II8 777 aa16.69■□□□□ 0.26
RPN1-201ENST00000296255 C1orf74Q96LT6 269 aa16.69■□□□□ 0.26
RPN1-201ENST00000296255 TRMOQ9BU70 441 aa16.69■□□□□ 0.26
RPN1-201ENST00000296255 DSEQ9UL01 958 aa16.69■□□□□ 0.26
RPN1-201ENST00000296255 CRYL1Q9Y2S2 319 aa16.69■□□□□ 0.26
RPN1-201ENST00000296255 PTGDR2Q9Y5Y4 395 aa16.69■□□□□ 0.26
RPN1-201ENST00000296255 CEP350Q5VT06 3117 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 GJB3O75712 270 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 SRP72O76094 671 aaKnown RBP16.68■□□□□ 0.26
RPN1-201ENST00000296255 ASLP04424 464 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 CD52P31358 61 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 SH3BP2P78314 561 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 TXNL4AP83876 142 aaKnown RBP16.68■□□□□ 0.26
RPN1-201ENST00000296255 TSPY1Q01534 308 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 MGAT3Q09327 533 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 MAP7Q14244 749 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 MAPRE1Q15691 268 aaKnown RBP16.68■□□□□ 0.26
RPN1-201ENST00000296255 SAMD4BQ5PRF9 694 aaKnown RBP16.68■□□□□ 0.26
RPN1-201ENST00000296255 MARC1Q5VT66 337 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 SDHAF4Q5VUM1 108 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 ZNF549Q6P9A3 640 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 HACD2Q6Y1H2 254 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 CARM1Q86X55 608 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 PGBD5Q8N414 524 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 OR52K2Q8NGK3 314 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 C19orf60Q96EN9 201 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 DNAJC1Q96KC8 554 aaKnown RBP16.68■□□□□ 0.26
RPN1-201ENST00000296255 NOL11Q9H8H0 719 aaKnown RBP16.68■□□□□ 0.26
RPN1-201ENST00000296255 PRDM5Q9NQX1 630 aaPredicted RBP16.68■□□□□ 0.26
RPN1-201ENST00000296255 GIMAP2Q9UG22 337 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 CLEC11AQ9Y240 323 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.68■□□□□ 0.26
RPN1-201ENST00000296255 DOCK4Q8N1I0 1966 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 CCDC160A6NGH7 325 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 LDB2O43679 373 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 ATXN1LP0C7T5 689 aaKnown RBP16.68■□□□□ 0.26
RPN1-201ENST00000296255 NELFEP18615 380 aaKnown RBP16.68■□□□□ 0.26
RPN1-201ENST00000296255 ACADVLP49748 655 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 ATP4BP51164 291 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 PTPRCAPQ14761 206 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 CXCL17Q6UXB2 119 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 SCN4BQ8IWT1 228 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 THEM5Q8N1Q8 247 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 MYO1HQ8N1T3 1032 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 ARRDC2Q8TBH0 407 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 PSMG2Q969U7 264 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 SLC39A13Q96H72 371 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 CIB1Q99828 191 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 AKTIPQ9H8T0 292 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 VPS45Q9NRW7 570 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 PADI4Q9UM07 663 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 DMTF1Q9Y222 760 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 DNAJC15Q9Y5T4 150 aa16.68■□□□□ 0.26
RPN1-201ENST00000296255 ARHGEF37A1IGU5 675 aa16.67■□□□□ 0.26
RPN1-201ENST00000296255 KLHL33A6NCF5 533 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms