RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 RXRGP48443 463 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 SP140Q13342 867 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 DGUOKQ16854 277 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 OAFQ86UD1 273 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 CEP295NLQ96MC4 621 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 RRN3Q9NYV6 651 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 MAP4K5Q9Y4K4 846 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 HYKKA2RU49 373 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 TMEM88BA6NKF7 163 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 RARRES1P49788 294 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 LIN54Q6MZP7 749 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 UNC5AQ6ZN44 842 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 PCDH9Q9HC56 1237 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 NECTIN3Q9NQS3 549 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 SLC12A3P55017 1021 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 CYB5D1Q6P9G0 228 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 CFAP206Q8IYR0 622 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 FBXO22Q8NEZ5 403 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 ZMIZ2Q8NF64 920 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 MYO19Q96H55 970 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 CLDND1Q9NY35 253 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 ABI3Q9P2A4 366 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 MTF2Q9Y483 593 aaPredicted RBP20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 SLURP2P0DP57 97 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 HNRNPLP14866 589 aaKnown RBP eCLIP20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 FCHO2Q0JRZ9 810 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 MAP2K5Q13163 448 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 SMCO1Q147U7 214 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 DAGLBQ8NCG7 672 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 APOPT1Q96IL0 206 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 IL12RB2Q99665 862 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 U3KQV3 271 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 NRLP54845 237 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 PITRM1Q5JRX3 1037 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 NAT9Q9BTE0 207 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 HCN3Q9P1Z3 774 aa20.38■□□□□ 0.85
CACNA1B-201ENST00000277549 GRM6O15303 877 aa20.37■□□□□ 0.85
CACNA1B-201ENST00000277549 PDE9AO76083 593 aa20.37■□□□□ 0.85
CACNA1B-201ENST00000277549 PLEKHA1Q9HB21 404 aa20.37■□□□□ 0.85
CACNA1B-201ENST00000277549 TFEBP19484 476 aa20.37■□□□□ 0.85
CACNA1B-201ENST00000277549 PCID2Q5JVF3 399 aa20.37■□□□□ 0.85
CACNA1B-201ENST00000277549 GALNT13Q8IUC8 556 aa20.37■□□□□ 0.85
CACNA1B-201ENST00000277549 STAG3L4Q8TBR4 150 aa20.37■□□□□ 0.85
CACNA1B-201ENST00000277549 DMTF1Q9Y222 760 aa20.37■□□□□ 0.85
CACNA1B-201ENST00000277549 ATP6AP2A0A1C7CYW4 349 aa20.37■□□□□ 0.85
CACNA1B-201ENST00000277549 ATP6AP2O75787 350 aa20.37■□□□□ 0.85
CACNA1B-201ENST00000277549 TGFB3P10600 412 aa20.37■□□□□ 0.85
CACNA1B-201ENST00000277549 ARFIP1P53367 373 aa20.37■□□□□ 0.85
CACNA1B-201ENST00000277549 MED22Q15528 200 aa20.37■□□□□ 0.85
CACNA1B-201ENST00000277549 FAM110BQ8TC76 370 aa20.37■□□□□ 0.85
CACNA1B-201ENST00000277549 HERVK_113Q902F9 699 aa20.37■□□□□ 0.85
CACNA1B-201ENST00000277549 UBE2QL1A1L167 161 aa20.37■□□□□ 0.85
CACNA1B-201ENST00000277549 ZSCAN5CA6NGD5 496 aaPredicted RBP20.37■□□□□ 0.85
CACNA1B-201ENST00000277549 C1QBPQ07021 282 aaKnown RBP20.37■□□□□ 0.85
CACNA1B-201ENST00000277549 SPESP1Q6UW49 350 aa20.37■□□□□ 0.85
CACNA1B-201ENST00000277549 SETD9Q8NE22 299 aa20.37■□□□□ 0.85
CACNA1B-201ENST00000277549 SLC47A1Q96FL8 570 aa20.37■□□□□ 0.85
CACNA1B-201ENST00000277549 LRRC72A6NJI9 287 aa20.37■□□□□ 0.85
CACNA1B-201ENST00000277549 MSCO60682 206 aa20.37■□□□□ 0.85
CACNA1B-201ENST00000277549 CBX6O95503 412 aa20.37■□□□□ 0.85
CACNA1B-201ENST00000277549 CDC25CP30307 473 aa20.37■□□□□ 0.85
CACNA1B-201ENST00000277549 RPL22P35268 128 aaKnown RBP20.37■□□□□ 0.85
CACNA1B-201ENST00000277549 ERGIC2Q96RQ1 377 aa20.37■□□□□ 0.85
CACNA1B-201ENST00000277549 SERPINA1P01009 418 aa20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 ACADLP28330 430 aa20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 AMIGO1Q86WK6 493 aa20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 DTNBP1Q96EV8 351 aa20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 LDAHQ9H6V9 325 aa20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 NINJ2Q9NZG7 142 aa20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 C9P02748 559 aa20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 KLHL35Q6PF15 583 aa20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 PTCHD4Q6ZW05 846 aa20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 SUN3Q8TAQ9 357 aa20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 TMEM216Q9P0N5 145 aa20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 GMIPQ9P107 970 aa20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 KIAA1522Q9P206 1035 aaPredicted RBP20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 MRTO4Q9UKD2 239 aaKnown RBP20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 SERPINA3P01011 423 aa20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 EFNA1P20827 205 aaPredicted RBP20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 CORO1AP31146 461 aaKnown RBP20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 SLC13A2Q13183 592 aa20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 UBAP2LQ14157 1087 aaKnown RBP20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 FRG1Q14331 258 aaKnown RBP20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 TTC29Q8NA56 475 aaPredicted RBP20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 COPS4Q9BT78 406 aa20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 RPL17P18621 184 aaKnown RBP20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 GNPDA1P46926 289 aa20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 CXCR3P49682 368 aa20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 MAPKAPK3Q16644 382 aa20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 GDF6Q6KF10 455 aaPredicted RBP20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 WDR59Q6PJI9 974 aa20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 ZNF730Q6ZMV8 503 aa20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 TRMT13Q9NUP7 481 aaKnown RBP20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 NKIRAS2Q9NYR9 191 aa20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 FUT4P22083 530 aa20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 BCAP31P51572 246 aa20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 KCNA10Q16322 511 aa20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 ALG1LQ6GMV1 187 aa20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 OTOP1Q7RTM1 612 aa20.36■□□□□ 0.85
CACNA1B-201ENST00000277549 PER2O15055 1255 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms