RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 LACTBL1A8MY62 500 aa16.33■□□□□ 0.2
GPC1-201ENST00000264039 G3V2L1 256 aa16.33■□□□□ 0.2
GPC1-201ENST00000264039 ARHGEF9O43307 516 aa16.33■□□□□ 0.2
GPC1-201ENST00000264039 INMTO95050 263 aa16.33■□□□□ 0.2
GPC1-201ENST00000264039 THRBP10828 461 aa16.33■□□□□ 0.2
GPC1-201ENST00000264039 HK2P52789 917 aa16.33■□□□□ 0.2
GPC1-201ENST00000264039 RAB10P61026 200 aa16.33■□□□□ 0.2
GPC1-201ENST00000264039 PFKPQ01813 784 aa16.33■□□□□ 0.2
GPC1-201ENST00000264039 ZFP69Q49AA0 526 aa16.33■□□□□ 0.2
GPC1-201ENST00000264039 PRAMEF18Q5VWM3 479 aa16.33■□□□□ 0.2
GPC1-201ENST00000264039 PSTKQ8IV42 348 aaKnown RBP16.33■□□□□ 0.2
GPC1-201ENST00000264039 SP8Q8IXZ3 490 aa16.33■□□□□ 0.2
GPC1-201ENST00000264039 FAR2Q96K12 515 aa16.33■□□□□ 0.2
GPC1-201ENST00000264039 GBA3Q9H227 469 aa16.33■□□□□ 0.2
GPC1-201ENST00000264039 SDHDO14521 159 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 ZBTB24O43167 697 aaPredicted RBP16.32■□□□□ 0.2
GPC1-201ENST00000264039 FAM20BO75063 409 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 BCAS1O75363 584 aaPredicted RBP16.32■□□□□ 0.2
GPC1-201ENST00000264039 CST1P01037 141 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 ARHGDIAP52565 204 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 FAM98BQ52LJ0 330 aaKnown RBP16.32■□□□□ 0.2
GPC1-201ENST00000264039 TIFABQ6ZNK6 161 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 LGI2Q8N0V4 545 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 SPATA22Q8NHS9 363 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 S100ZQ8WXG8 99 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 ESAMQ96AP7 390 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 ITCHQ96J02 903 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 MUC3BQ9H195 1237 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 PLIN4Q96Q06 1357 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 ACOT8O14734 319 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 GCATO75600 419 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 ZNF682O95780 498 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 EFNA5P52803 228 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 PLA2G16P53816 162 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 NAPEPLDQ6IQ20 393 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 KCTD15Q96SI1 283 aaPredicted RBP16.32■□□□□ 0.2
GPC1-201ENST00000264039 GAD1Q99259 594 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 IL12RB2Q99665 862 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 ZNF670Q9BS34 389 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 BTBD3Q9Y2F9 522 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 ILVBLA1L0T0 632 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 CCDC154A6NI56 674 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 LRIG2O94898 1065 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 WDR47O94967 919 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 FKBP9O95302 570 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 STAG3L1P0CL83 205 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 MTHFRP42898 656 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 PPIL2Q13356 520 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 TAB1Q15750 504 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 PHKG1Q16816 387 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.32■□□□□ 0.2
GPC1-201ENST00000264039 GLYATQ6IB77 296 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 HMBOX1Q6NT76 420 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 FKBP9P1Q75LS8 142 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 OTOP3Q7RTS5 596 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 ARMC8Q8IUR7 673 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 SH3YL1Q96HL8 342 aaPredicted RBP16.32■□□□□ 0.2
GPC1-201ENST00000264039 LTB4R2Q9NPC1 389 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 PRDM8Q9NQV8 689 aa16.32■□□□□ 0.2
GPC1-201ENST00000264039 MYH14Q7Z406 1995 aaKnown RBP16.31■□□□□ 0.2
GPC1-201ENST00000264039 BDNFP23560 247 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 TNK2Q07912 1038 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 STXBP2Q15833 593 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 NHSL2Q5HYW2 709 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 UGT3A1Q6NUS8 523 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 LRRC8DQ7L1W4 858 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 PORCNQ9H237 461 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 ZNF221Q9UK13 617 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 PTBP2Q9UKA9 531 aaKnown RBP16.31■□□□□ 0.2
GPC1-201ENST00000264039 STAP1Q9ULZ2 295 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 ASB14A6NK59 587 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 SIX3O95343 332 aaPredicted RBP16.31■□□□□ 0.2
GPC1-201ENST00000264039 SUPT20HL2P0C7V6 817 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 NR2C2P49116 596 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 RABGGTBP53611 331 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 NCS1P62166 190 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 CTBSQ01459 385 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 SUPT20HL1Q3ZLR7 823 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 TTC23Q5W5X9 447 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 VASH1Q7L8A9 365 aaPredicted RBP16.31■□□□□ 0.2
GPC1-201ENST00000264039 TMEM126BQ8IUX1 230 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 FLCNQ8NFG4 579 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 RUBCNLQ9H714 662 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 SPON1Q9HCB6 807 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 GPD2P43304 727 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 NOVP48745 357 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 CACNB2Q08289 660 aaPredicted RBP16.31■□□□□ 0.2
GPC1-201ENST00000264039 TREML2Q5T2D2 321 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 C15orf39Q6ZRI6 1047 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 ANKRD13BQ86YJ7 626 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 FAM126BQ8IXS8 530 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 FNDC5Q8NAU1 212 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 RDH11Q8TC12 318 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 ITPKCQ96DU7 683 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 HSFY1Q96LI6 401 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 DDIT4Q9NX09 232 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 EHD3Q9NZN3 535 aa16.31■□□□□ 0.2
GPC1-201ENST00000264039 NFASCO94856 1347 aa16.3■□□□□ 0.2
GPC1-201ENST00000264039 MT-CYBP00156 380 aaPredicted RBP16.3■□□□□ 0.2
GPC1-201ENST00000264039 FMO4P31512 558 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms