RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 RNF31Q96EP0 1072 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 NSMCE3Q96MG7 304 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 BTBD10Q9BSF8 475 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 VN1R3Q9BXE9 311 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 PCDHAC1Q9H158 963 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 CSNK1G1Q9HCP0 422 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 CASS4Q9NQ75 786 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 ABCB8Q9NUT2 735 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 TRHDEQ9UKU6 1024 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 SOX13Q9UN79 622 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 TLR6Q9Y2C9 796 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 RAI2Q9Y5P3 530 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 WNT6Q9Y6F9 365 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 MYO10Q9HD67 2058 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 NR5A2O00482 541 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 VNN2O95498 520 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 OAS1P00973 400 aaKnown RBP9.12□□□□□ -0.95
CKAP2-201ENST00000258607 SKIP12755 728 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 AKT1P31749 480 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 MC4RP32245 332 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 FOXA1P55317 472 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 DSC1Q08554 894 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 AAK1Q2M2I8 961 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 DENND5AQ6IQ26 1287 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 MARK2Q7KZI7 788 aaKnown RBP9.12□□□□□ -0.95
CKAP2-201ENST00000258607 LYSMD3Q7Z3D4 306 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 ZBTB46Q86UZ6 589 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 ICA1LQ8NDH6 482 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 OR10Q1Q8NGQ4 319 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 SLC30A3Q99726 388 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 POLR3BQ9NW08 1133 aaPredicted RBP9.12□□□□□ -0.95
CKAP2-201ENST00000258607 MOSPD1Q9UJG1 213 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 AURKCQ9UQB9 309 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 SCN10AQ9Y5Y9 1956 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 LOC285556D6RIA3 1793 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 NCAM2O15394 837 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 CD3EAPO15446 510 aaKnown RBP9.12□□□□□ -0.95
CKAP2-201ENST00000258607 TIMM44O43615 452 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 STC2O76061 302 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 TMCC1O94876 653 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 EOMESO95936 686 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 CNPP09543 421 aaKnown RBP9.12□□□□□ -0.95
CKAP2-201ENST00000258607 PTDSS1P48651 473 aaKnown RBP9.12□□□□□ -0.95
CKAP2-201ENST00000258607 PPM1FP49593 454 aaPredicted RBP9.12□□□□□ -0.95
CKAP2-201ENST00000258607 COPAP53621 1224 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 CASP9P55211 416 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 GPR17Q13304 367 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 TRIP10Q15642 601 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 AP5B1Q2VPB7 878 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 EMC10Q5UCC4 262 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 PTRHD1Q6GMV3 140 aaKnown RBP9.12□□□□□ -0.95
CKAP2-201ENST00000258607 LINC00523Q86TU6 105 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 TRIM74Q86UV6 250 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 RELL1Q8IUW5 271 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 SCUBE1Q8IWY4 988 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 SLC22A15Q8IZD6 547 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 BEND7Q8N7W2 519 aaPredicted RBP9.12□□□□□ -0.95
CKAP2-201ENST00000258607 LRRC39Q96DD0 335 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 IGSF21Q96ID5 467 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 ZNF558Q96NG5 402 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 DHRS4Q9BTZ2 278 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 ZFP14Q9HCL3 533 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 RNF112Q9ULX5 631 aa9.12□□□□□ -0.95
CKAP2-201ENST00000258607 TYW5A2RUC4 315 aaKnown RBP9.11□□□□□ -0.95
CKAP2-201ENST00000258607 ZNF840PA6NDX5 716 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 OR2AG2A6NM03 316 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 GIPC1O14908 333 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 CLDN7O95471 211 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 C8AP07357 584 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 CCNCP24863 283 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 CTNNB1P35222 781 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 APLP1P51693 650 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 GSCP56915 257 aaPredicted RBP9.11□□□□□ -0.95
CKAP2-201ENST00000258607 TBL3Q12788 808 aaKnown RBP9.11□□□□□ -0.95
CKAP2-201ENST00000258607 FRA10AC1Q70Z53 315 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 PIWIL4Q7Z3Z4 852 aaKnown RBP9.11□□□□□ -0.95
CKAP2-201ENST00000258607 TMEM135Q86UB9 458 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 LRRC43Q8N309 656 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 BBS5Q8N3I7 341 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 KLHL23Q8NBE8 558 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 PRICKLE1Q96MT3 831 aaPredicted RBP9.11□□□□□ -0.95
CKAP2-201ENST00000258607 TCF25Q9BQ70 676 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 RHOJQ9H4E5 214 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 PFDN4Q9NQP4 134 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 NOP53Q9NZM5 478 aaKnown RBP9.11□□□□□ -0.95
CKAP2-201ENST00000258607 PRKAG2Q9UGJ0 569 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 VWA7Q9Y334 891 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 PRKAB1Q9Y478 270 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.11□□□□□ -0.95
CKAP2-201ENST00000258607 WASH3PC4AMC7 463 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 H3BMM5 538 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 TBX10O75333 385 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 DNAJC8O75937 253 aaPredicted RBP9.11□□□□□ -0.95
CKAP2-201ENST00000258607 SEC24DO94855 1032 aaPredicted RBP9.11□□□□□ -0.95
CKAP2-201ENST00000258607 OAZ2O95190 189 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 PFKPQ01813 784 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 MAP7D1Q3KQU3 841 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 BRMS1LQ5PSV4 323 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 NAIF1Q69YI7 327 aaPredicted RBP9.11□□□□□ -0.95
CKAP2-201ENST00000258607 KLC3Q6P597 504 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms