RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 ATL2Q8NHH9 583 aa12.81□□□□□ -0.36
VPREB3-201ENST00000248948 TFB1MQ8WVM0 346 aaKnown RBP12.81□□□□□ -0.36
VPREB3-201ENST00000248948 BTN2A2Q8WVV5 523 aa12.81□□□□□ -0.36
VPREB3-201ENST00000248948 PIH1D2Q8WWB5 315 aa12.81□□□□□ -0.36
VPREB3-201ENST00000248948 NUS1Q96E22 293 aa12.81□□□□□ -0.36
VPREB3-201ENST00000248948 COQ10AQ96MF6 247 aa12.81□□□□□ -0.36
VPREB3-201ENST00000248948 QKIQ96PU8 341 aaKnown RBP eCLIP12.81□□□□□ -0.36
VPREB3-201ENST00000248948 LYSMD1Q96S90 227 aa12.81□□□□□ -0.36
VPREB3-201ENST00000248948 MBNL1Q9NR56 388 aaKnown RBP12.81□□□□□ -0.36
VPREB3-201ENST00000248948 DNAJC28Q9NX36 388 aa12.81□□□□□ -0.36
VPREB3-201ENST00000248948 ZFC3H1O60293 1989 aaKnown RBP12.8□□□□□ -0.36
VPREB3-201ENST00000248948 HACD1B0YJ81 288 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 SDC3O75056 442 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 JCHAINP01591 159 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 PCCBP05166 539 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 MMP2P08253 660 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 GM2AP17900 193 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 DGKAP23743 735 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 HTR1BP28222 390 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 TEAD1P28347 426 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 CETN2P41208 172 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 EPHB1P54762 984 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 NIPAL4Q0D2K0 466 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 FOXC1Q12948 553 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 XRCC4Q13426 336 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 ARHGEF7Q14155 803 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 NFATC4Q14934 902 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 NOMO1Q15155 1222 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 PEX26Q7Z412 305 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 RNF10Q8N5U6 811 aaKnown RBP12.8□□□□□ -0.36
VPREB3-201ENST00000248948 UBL4BQ8N7F7 174 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 ZNF548Q8NEK5 533 aaPredicted RBP12.8□□□□□ -0.36
VPREB3-201ENST00000248948 OR4C6Q8NH72 309 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 LRRN4Q8WUT4 740 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 UBE2Q2Q8WVN8 375 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 ADAMTS14Q8WXS8 1223 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 DTD2Q96FN9 168 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 IMP4Q96G21 291 aaKnown RBP12.8□□□□□ -0.36
VPREB3-201ENST00000248948 VAT1Q99536 393 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 PCDH9Q9HC56 1237 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 TOR4AQ9NXH8 423 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 NLGN3Q9NZ94 848 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 WASF3Q9UPY6 502 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 PCDHGA1Q9Y5H4 931 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 CAPN6Q9Y6Q1 641 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 ACACBO00763 2458 aa12.8□□□□□ -0.36
VPREB3-201ENST00000248948 SPEGQ15772 3267 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 NEMP2A6NFY4 417 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 ENC1O14682 589 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 KRT86O43790 486 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 NRDCO43847 1150 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 LDOC1O95751 146 aaPredicted RBP12.79□□□□□ -0.36
VPREB3-201ENST00000248948 PDHA1P08559 390 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 HOXC4P09017 264 aaPredicted RBP12.79□□□□□ -0.36
VPREB3-201ENST00000248948 ALPPL2P10696 532 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 CDK4P11802 303 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 TSHRP16473 764 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 KELP23276 732 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 PTPN3P26045 913 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 CD86P42081 329 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 BLKP51451 505 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 SKOR1P84550 965 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 SEMG2Q02383 582 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 ADCY2Q08462 1091 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 BNIP3Q12983 259 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 EIF2B5Q13144 721 aaKnown RBP12.79□□□□□ -0.36
VPREB3-201ENST00000248948 IHHQ14623 411 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 ACOX1Q15067 660 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 TEX44Q53QW1 395 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 HS1BP3Q53T59 392 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 TPRG1LQ5T0D9 272 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 KDM7AQ6ZMT4 941 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 RAB44Q7Z6P3 723 aaPredicted RBP12.79□□□□□ -0.36
VPREB3-201ENST00000248948 PHACTR4Q8IZ21 702 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 EID2Q8N6I1 236 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 ALG3Q92685 438 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 TADA1Q96BN2 335 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 CNDP2Q96KP4 475 aaKnown RBP12.79□□□□□ -0.36
VPREB3-201ENST00000248948 DUSP23Q9BVJ7 150 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 ADGRE3Q9BY15 652 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 OSBPL8Q9BZF1 889 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 SLC25A51Q9H1U9 297 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 WDR26Q9H7D7 661 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 SEPT10Q9P0V9 454 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 SAE1Q9UBE0 346 aaPredicted RBP12.79□□□□□ -0.36
VPREB3-201ENST00000248948 TRIM10Q9UDY6 481 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 APOBEC3BQ9UH17 382 aaKnown RBP12.79□□□□□ -0.36
VPREB3-201ENST00000248948 AMFRQ9UKV5 643 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 NEUROG3Q9Y4Z2 214 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 ADGRG1Q9Y653 693 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 CSNK1G3Q9Y6M4 447 aa12.79□□□□□ -0.36
VPREB3-201ENST00000248948 GOLGA4Q13439 2230 aaKnown RBP12.78□□□□□ -0.36
VPREB3-201ENST00000248948 CACNB4O00305 520 aaPredicted RBP12.78□□□□□ -0.36
VPREB3-201ENST00000248948 TJP3O95049 919 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 PRLP01236 227 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 PYGLP06737 847 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 ALPIP09923 528 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 JUNDP17535 347 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 HNF1BP35680 557 aa12.78□□□□□ -0.36
VPREB3-201ENST00000248948 TRIM23P36406 574 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms