RNA–Protein interactions for RNA: ENST00000236698.9

STAG1-201, Transcript of stromal antigen 1, humanhuman

TSL 1 (best) BASIC

Gene STAG1, Length 5,951 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1-201ENST00000236698 VAMP2P63027 116 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 GUCA2AQ02747 115 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 XRCC4Q13426 336 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 IL18R1Q13478 541 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 SNAPC2Q13487 334 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 IRAK1BP1Q5VVH5 260 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 ULK3Q6PHR2 472 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 LDHDQ86WU2 507 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 MPP5Q8N3R9 675 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 SYTL5Q8TDW5 730 aaPredicted RBP6.92□□□□□ -1.3
STAG1-201ENST00000236698 EDEM1Q92611 657 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 LRRC46Q96FV0 321 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 NEDD4LQ96PU5 975 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 ELF4Q99607 663 aaPredicted RBP6.92□□□□□ -1.3
STAG1-201ENST00000236698 PSD2Q9BQI7 771 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 C7orf50Q9BRJ6 194 aaKnown RBP6.92□□□□□ -1.3
STAG1-201ENST00000236698 C1QTNF1Q9BXJ1 281 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 TDRD3Q9H7E2 651 aaKnown RBP6.92□□□□□ -1.3
STAG1-201ENST00000236698 THAP1Q9NVV9 213 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 BCS1LQ9Y276 419 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 PLIN4Q96Q06 1357 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 PENKP01210 267 aaPredicted RBP6.92□□□□□ -1.3
STAG1-201ENST00000236698 HOXC6P09630 235 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 GTF2H1P32780 548 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 EIF5AP63241 154 aaKnown RBP6.92□□□□□ -1.3
STAG1-201ENST00000236698 PRAMEP78395 509 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 OVGP1Q12889 678 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 TRAF3Q13114 568 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 HNRNPDQ14103 355 aaKnown RBP6.92□□□□□ -1.3
STAG1-201ENST00000236698 E2F2Q14209 437 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 ZNF460Q14592 562 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 EMC2Q15006 297 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 UBE2SQ16763 222 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 PCGF3Q3KNV8 242 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 CTXN3Q4LDR2 81 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 MTFR2Q6P444 385 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 USP17L6PQ6QN14 398 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 SH2D3CQ8N5H7 860 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 SLC20A1Q8WUM9 679 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 FCGR1BQ92637 280 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 SLC9A7Q96T83 725 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 PFDN5Q99471 154 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 GPR61Q9BZJ8 451 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 POLR3FQ9H1D9 316 aaPredicted RBP6.92□□□□□ -1.3
STAG1-201ENST00000236698 PAQR5Q9NXK6 330 aaPredicted RBP6.92□□□□□ -1.3
STAG1-201ENST00000236698 XPR1Q9UBH6 696 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 CHTOPQ9Y3Y2 248 aaKnown RBP6.92□□□□□ -1.3
STAG1-201ENST00000236698 ADGRA3Q8IWK6 1321 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 H3BUI4 141 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 DFNA5O60443 496 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 TADA2AO75478 443 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 ZNF888P0CJ79 500 aaPredicted RBP6.92□□□□□ -1.3
STAG1-201ENST00000236698 RGS2P41220 211 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 CPA2P48052 419 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 AIF1P55008 147 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 CNTN1Q12860 1018 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 PCBP1Q15365 356 aaKnown RBP eCLIP6.92□□□□□ -1.3
STAG1-201ENST00000236698 HAUS6Q7Z4H7 955 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 LONP2Q86WA8 852 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 CENPSQ8N2Z9 138 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 FAM213AQ9BRX8 229 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 LRRC19Q9H756 370 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 ABCB9Q9NP78 766 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 RNF146Q9NTX7 359 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.92□□□□□ -1.3
STAG1-201ENST00000236698 C19orf53Q9UNZ5 99 aaPredicted RBP6.92□□□□□ -1.3
STAG1-201ENST00000236698 POLHQ9Y253 713 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 PCDHGA11Q9Y5H2 935 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 ADAMTSL3P82987 1691 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 TCP11X1B4DZS4 312 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 FOXN1O15353 648 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 GCATO75600 419 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 SERPINA3P01011 423 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 PABPC4LP0CB38 370 aaKnown RBP6.92□□□□□ -1.3
STAG1-201ENST00000236698 IRAK1P51617 712 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 ZNF280AP59817 542 aaPredicted RBP6.92□□□□□ -1.3
STAG1-201ENST00000236698 DCAF7P61962 342 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 PRKCZQ05513 592 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 SMARCB1Q12824 385 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 KCNAB2Q13303 367 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 C10orf120Q5SQS8 335 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 NXPE4Q6UWF7 544 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 ERN2Q76MJ5 926 aaKnown RBP6.92□□□□□ -1.3
STAG1-201ENST00000236698 PAGE2Q7Z2X7 111 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 ELMOD2Q8IZ81 293 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 FAM71DQ8N9W8 422 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 LINGO1Q96FE5 620 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 NFKBIZQ9BYH8 718 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 SLC6A15Q9H2J7 730 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 TPK1Q9H3S4 243 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 PHF11Q9UIL8 331 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 NAALADL1Q9UQQ1 740 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 A8MX80 341 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 TSPAN4O14817 238 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 FMO6PO60774 539 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 SNRPAP09012 282 aaKnown RBP6.92□□□□□ -1.3
STAG1-201ENST00000236698 UCHL3P15374 230 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 DHPSP49366 369 aaPredicted RBP6.92□□□□□ -1.3
STAG1-201ENST00000236698 SERPINB9P50453 376 aa6.92□□□□□ -1.3
STAG1-201ENST00000236698 SLC7A2P52569 658 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms