RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 DSELQ8IZU8 1212 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 B3GALNT2Q8NCR0 500 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 TMIEQ8NEW7 156 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 OMA1Q96E52 524 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 EVA1BQ9NVM1 165 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 SNCAIPQ9Y6H5 919 aa4.43□□□□□ -1.7
CHD9-201ENST00000219084 TNRC6CQ9HCJ0 1690 aaKnown RBP4.42□□□□□ -1.7
CHD9-201ENST00000219084 A0A0G2JLW4 131 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 E5RJQ4 531 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 MBL2P11226 248 aaPredicted RBP4.42□□□□□ -1.7
CHD9-201ENST00000219084 PSMA1P25786 263 aaKnown RBP4.42□□□□□ -1.7
CHD9-201ENST00000219084 GTF2E2P29084 291 aaKnown RBP4.42□□□□□ -1.7
CHD9-201ENST00000219084 PTPN9P43378 593 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 PITPNAQ00169 270 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 ABRQ12979 859 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 TAF1CQ15572 869 aaPredicted RBP4.42□□□□□ -1.7
CHD9-201ENST00000219084 ZNHIT3Q15649 155 aaPredicted RBP4.42□□□□□ -1.7
CHD9-201ENST00000219084 PLEKHG6Q3KR16 790 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 CELF3Q5SZQ8 465 aaKnown RBP4.42□□□□□ -1.7
CHD9-201ENST00000219084 CCNYL2Q5T2Q4 361 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 FAM183BPQ6ZVS7 135 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 PTAR1Q7Z6K3 402 aaPredicted RBP4.42□□□□□ -1.7
CHD9-201ENST00000219084 ANKRD23Q86SG2 305 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 VSIG10LQ86VR7 867 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 ZFPM1Q8IX07 1006 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 TMEM192Q8IY95 271 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 C4orf32Q8N8J7 132 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 HJURPQ8NCD3 748 aaPredicted RBP4.42□□□□□ -1.7
CHD9-201ENST00000219084 FLCNQ8NFG4 579 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 MED8Q96G25 268 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 FAM84AQ96KN4 292 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 TUBA1CQ9BQE3 449 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 PCBD2Q9H0N5 130 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 SEMA3GQ9NS98 782 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 SNTG2Q9NY99 539 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 CACNA1SQ13698 1873 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 COL22A1Q8NFW1 1626 aaPredicted RBP4.42□□□□□ -1.7
CHD9-201ENST00000219084 CCL15-CCL14A0A0B4J2E2 113 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 NCF1BA6NI72 391 aaPredicted RBP4.42□□□□□ -1.7
CHD9-201ENST00000219084 NCF1CA8MVU1 366 aaPredicted RBP4.42□□□□□ -1.7
CHD9-201ENST00000219084 XYLBO75191 536 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 DHFRP00374 187 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 NTRK1P04629 796 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 NCF1P14598 390 aaPredicted RBP4.42□□□□□ -1.7
CHD9-201ENST00000219084 LPOP22079 712 aaPredicted RBP4.42□□□□□ -1.7
CHD9-201ENST00000219084 RBL1P28749 1068 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 PIK3CBP42338 1070 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 MAPKAPK2P49137 400 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 NOMO1Q15155 1222 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 FAM189A2Q15884 450 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 CCL15Q16663 113 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 LIN52Q52LA3 116 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 FAXCQ5TGI0 409 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 EMC10Q5UCC4 262 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 LCLAT1Q6UWP7 414 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 C16orf62Q7Z3J2 963 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 OFCC1Q8IZS5 231 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 CPSF7Q8N684 471 aaKnown RBP4.42□□□□□ -1.7
CHD9-201ENST00000219084 MARCH10Q8NA82 808 aaPredicted RBP4.42□□□□□ -1.7
CHD9-201ENST00000219084 GOLM1Q8NBJ4 401 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 ZNF540Q8NDQ6 660 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 PPTC7Q8NI37 304 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 PHF21BQ96EK2 531 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 BBS4Q96RK4 519 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 NDNQ99608 321 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 ARL15Q9NXU5 204 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 PRKAG3Q9UGI9 489 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 ZMYM5Q9UJ78 669 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 TRPV2Q9Y5S1 764 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 DDX3YO15523 660 aaKnown RBP4.42□□□□□ -1.7
CHD9-201ENST00000219084 RGS20O76081 388 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 PARNO95453 639 aaKnown RBP4.42□□□□□ -1.7
CHD9-201ENST00000219084 PEPDP12955 493 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 UGT1A5P35504 534 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 UBE3AQ05086 875 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 GNASQ5JWF2 1037 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 C9orf43Q8TAL5 461 aaPredicted RBP4.42□□□□□ -1.7
CHD9-201ENST00000219084 SLC2A14Q8TDB8 520 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 UBASH3BQ8TF42 649 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 KAT2BQ92831 832 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 CDCA5Q96FF9 252 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 SHCBP1LQ9BZQ2 653 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 ZNF624Q9P2J8 865 aaPredicted RBP4.42□□□□□ -1.7
CHD9-201ENST00000219084 UPB1Q9UBR1 384 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 CKLFQ9UBR5 152 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 MRTO4Q9UKD2 239 aaKnown RBP4.42□□□□□ -1.7
CHD9-201ENST00000219084 TRAF6Q9Y4K3 522 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 NWD2Q9ULI1 1742 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 ATAD5Q96QE3 1844 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 MEIS2O14770 477 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 BCKDKO14874 412 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 PGM3O95394 542 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 H6PDO95479 791 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 NR2F6P10588 404 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 THPOP40225 353 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 CDKN2BP42772 138 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 GLUD2P49448 558 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 NRF1Q16656 503 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 RALGPS1Q5JS13 557 aa4.42□□□□□ -1.7
CHD9-201ENST00000219084 DENND6AQ8IWF6 608 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms