RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Neu1O35657 409 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Cdkl4Q3TZA2 342 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Tars2Q3UQ84 723 aaKnown RBP15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Gm5800Q497L3 186 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Lrp8Q924X6 996 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Lrrc40Q9CRC8 602 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 D3Ertd751eQ8BGN2 192 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 KyQ8C8H8 661 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Gprc5cQ8K3J9 440 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Pitrm1Q8K411 1036 aaKnown RBP15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Nphs2Q91X05 385 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 XkQ9QXY7 446 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Ces1cP23953 554 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 ThrbP37242 461 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 MatkP41242 505 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Rnf113a2Q14B01 337 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Nr2f1Q60632 422 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Snx32Q80ZJ7 404 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Acbd7Q9D258 88 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Tmem176aQ9DCS1 244 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Plod2Q9R0B9 737 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Nup205A0A0J9YUD5 2061 aaKnown RBP15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Slfn3A0A1L1STQ7 640 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Lcn5A2AJB7 192 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Prl2c2P04095 224 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Fam35aQ3UEN2 891 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Tll1Q62381 1013 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Arl5aQ80ZU0 179 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Fstl5Q8BFR2 847 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Zswim3Q8CFL8 695 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Q9CPS8 106 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Arl8bQ9CQW2 186 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Mst1rQ62190 1378 aa15.73■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Traf6P70196 530 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 LcorlQ3U285 600 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Rcsd1Q3UZA1 412 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 NkaplQ5SZT7 395 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Echs1Q8BH95 290 aaKnown RBP15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Usp26Q99MX1 835 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Ighv11-2A0A075B5R8 117 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Gm28363A0A087WQW2 129 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Vmn2r125D3Z3M1 369 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Hsd17b7O88736 334 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Slc17a7Q3TXX4 560 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Ddx52Q8K301 598 aaKnown RBP15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Kdelr1Q99JH8 212 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Znf687Q9D2D7 1237 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 CercamA3KGW5 592 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Ifnar2O35664 513 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Nt5c2Q3V1L4 560 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Scube3Q66PY1 993 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Ube3cQ80U95 1083 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Cndp1Q8BUG2 492 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Colec12Q8K4Q8 742 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Klrc2Q9WTJ9 238 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 BicraF8VPZ9 1578 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Kbtbd8Q3UQV5 599 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Senp5Q6NXL6 749 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Thap3Q8BJ25 218 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Acvr1cQ8K348 493 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Cnot6Q8K3P5 557 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Cma1P21844 247 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Rps17P63276 135 aaKnown RBP15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Trim24Q64127 1051 aaKnown RBP15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Fnip2Q80TD3 1108 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Mcoln2Q8K595 566 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 OscarQ8VBT3 265 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Rnaseh2aQ9CWY8 301 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Cyp2b19O55071 492 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 WarsP32921 481 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Nudt2P56380 147 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Zfp180Q6NZI9 655 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Glra2Q7TNC8 452 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Akr1c13Q8VC28 323 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Robo2Q7TPD3 1470 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Arfip1G5E8V9 373 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 TpmtO55060 240 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Ankrd53Q3V0J4 497 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 NrrosQ8BMT4 693 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Acad9Q8JZN5 625 aaKnown RBP15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Duoxa2Q9D311 320 aa15.72■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Zfp985A2A7A5 519 aa15.71■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Tyw5A2RSX7 315 aa15.71■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Ninj1O70131 152 aa15.71■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Plin2P43883 425 aa15.71■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Klhl6Q6V595 619 aa15.71■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Ap3s2Q8BSZ2 193 aa15.71■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Olfr697Q8VFM4 317 aa15.71■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Olfr393Q8VGR6 312 aa15.71■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Eif3kQ9DBZ5 218 aa15.71■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Vmn2r73D3Z7M3 851 aa15.71■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Prdm15E9Q8T2 1174 aa15.71■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Lypla1P97823 230 aa15.71■□□□□ 0.11
Ubr3-201ENSMUST00000055758 D630036H23RikQ3UQD6 204 aa15.71■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Ssx9Q6XAS3 170 aa15.71■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Ppm1lQ8BHN0 360 aa15.71■□□□□ 0.11
Ubr3-201ENSMUST00000055758 SgtaQ8BJU0 315 aa15.71■□□□□ 0.11
Ubr3-201ENSMUST00000055758 Mnd1Q8K396 205 aa15.71■□□□□ 0.11
Ubr3-201ENSMUST00000055758 PrccQ9EQC8 491 aaKnown RBP15.71■□□□□ 0.11
Ubr3-201ENSMUST00000055758 B3galt4Q9Z0F0 371 aa15.71■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms