RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	CILP	O75339	1184 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	AVIL	O75366	819 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	TMEM63A	O94886	807 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	CELF2	O95319	508 aa	Known RBP	10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	CALCA	P01258	141 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	SMPD1	P17405	629 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	DDX5	P17844	614 aa	Known RBP	10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	IL12A	P29459	219 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	CD40LG	P29965	261 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	CPT1A	P50416	773 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	AP2S1	P53680	142 aa	Predicted RBP	10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	PKNOX1	P55347	436 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	GAD2	Q05329	585 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	INCA1	Q0VD86	236 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	MAP2K5	Q13163	448 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	DNASE1L3	Q13609	305 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	SMU1	Q2TAY7	513 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	RSBN1	Q5VWQ0	802 aa	Predicted RBP	10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	ZCCHC8	Q6NZY4	707 aa	Known RBP	10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	FAM122C	Q6P4D5	195 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	MFSD7	Q6UXD7	560 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	OSTM1	Q86WC4	334 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	IGDCC3	Q8IVU1	814 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	ADGRF2	Q8IZF7	708 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	CLYBL	Q8N0X4	340 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	CMAS	Q8NFW8	434 aa	Predicted RBP	10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	TMEM176A	Q96HP8	235 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	MTG1	Q9BT17	334 aa	Predicted RBP	10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	MKRN2	Q9H000	416 aa	Known RBP	10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	SEMA6A	Q9H2E6	1030 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	DCDC2	Q9UHG0	476 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	SIX4	Q9UIU6	781 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	CNOT6	Q9ULM6	557 aa	Known RBP	10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	PCDHB12	Q9Y5F1	795 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	PDCD11	Q14690	1871 aa	Known RBP	10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	TCRBV5S1A1T	A0A578	114 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	AURKA	O14965	403 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	CFLAR	O15519	480 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	PLIN3	O60664	434 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	ABCB7	O75027	752 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	PIAS1	O75925	651 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	VAPB	O95292	243 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	F2	P00734	622 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	GRK3	P35626	688 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	GJC1	P36383	396 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	CAPG	P40121	348 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	ZNF135	P52742	658 aa	Predicted RBP	10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	PPP5C	P53041	499 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	GALK2	Q01415	458 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	RAD51	Q06609	339 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	VAC14	Q08AM6	782 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	NEDD8	Q15843	81 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	TFDP3	Q5H9I0	405 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	CYP4A22	Q5TCH4	519 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	FKBP9P1	Q75LS8	142 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	CATSPER4	Q7RTX7	472 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	BTLA	Q7Z6A9	289 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	REM2	Q8IYK8	340 aa	Predicted RBP	10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	LRRC52	Q8N7C0	313 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	OR6Q1	Q8NGQ2	317 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	RSAD2	Q8WXG1	361 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	SOCS4	Q8WXH5	440 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	SLCO4A1	Q96BD0	722 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	RCN3	Q96D15	328 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	KIF12	Q96FN5	646 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	CPB2	Q96IY4	423 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	ZNF668	Q96K58	619 aa	Predicted RBP	10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	ZNF560	Q96MR9	790 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	PSKH2	Q96QS6	385 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	CIB1	Q99828	191 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	ZNF385D	Q9H6B1	395 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	SYTL2	Q9HCH5	934 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	ATP13A2	Q9NQ11	1180 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	DPP3	Q9NY33	737 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	SEPT10	Q9P0V9	454 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	TXNDC16	Q9P2K2	825 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	ZNF221	Q9UK13	617 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	PACSIN3	Q9UKS6	424 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306		Q9Y3F1	56 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	GPSM3	Q9Y4H4	160 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	SNX13	Q9Y5W8	968 aa		10.82	□□□□□ -0.68
CHD2-223	ENST00000636306	TANC1	Q9C0D5	1861 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	OR5K3	A6NET4	321 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306		H7C0C1	242 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	DLGAP1	O14490	977 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	SOCS2	O14508	198 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	CHAD	O15335	359 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	BCAS1	O75363	584 aa	Predicted RBP	10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	H2AFY	O75367	372 aa	Known RBP	10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	PTTG1	O95997	202 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	CFH	P08603	1231 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	ENO3	P13929	434 aa	Predicted RBP	10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	PSMA2	P25787	234 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	GSTM2	P28161	218 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	NKX2-5	P52952	324 aa	Predicted RBP	10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	RPL10A	P62906	217 aa	Known RBP	10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	TSPY1	Q01534	308 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	BFSP2	Q13515	415 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	GALNT3	Q14435	633 aa		10.81	□□□□□ -0.68
CHD2-223	ENST00000636306	ATP6AP1	Q15904	470 aa		10.81	□□□□□ -0.68

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