RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 ZC3H18Q86VM9 953 aaKnown RBP17.12■□□□□ 0.33
LIN28B-202ENST00000635857 ZSWIM9Q86XI8 627 aa17.12■□□□□ 0.33
LIN28B-202ENST00000635857 OR13H1Q8NG92 308 aa17.12■□□□□ 0.33
LIN28B-202ENST00000635857 UBE2Q2Q8WVN8 375 aa17.12■□□□□ 0.33
LIN28B-202ENST00000635857 IL12RB2Q99665 862 aa17.12■□□□□ 0.33
LIN28B-202ENST00000635857 OSBPL8Q9BZF1 889 aa17.12■□□□□ 0.33
LIN28B-202ENST00000635857 DNPEPQ9ULA0 475 aa17.12■□□□□ 0.33
LIN28B-202ENST00000635857 EFR3BQ9Y2G0 817 aa17.12■□□□□ 0.33
LIN28B-202ENST00000635857 SPTBN4Q9H254 2564 aa17.12■□□□□ 0.33
LIN28B-202ENST00000635857 HACD1B0YJ81 288 aa17.11■□□□□ 0.33
LIN28B-202ENST00000635857 TOR1BO14657 336 aa17.11■□□□□ 0.33
LIN28B-202ENST00000635857 PGLSO95336 258 aa17.11■□□□□ 0.33
LIN28B-202ENST00000635857 FTCDO95954 541 aa17.11■□□□□ 0.33
LIN28B-202ENST00000635857 CD59P13987 128 aa17.11■□□□□ 0.33
LIN28B-202ENST00000635857 VIPR1P32241 457 aa17.11■□□□□ 0.33
LIN28B-202ENST00000635857 GRK6P43250 576 aa17.11■□□□□ 0.33
LIN28B-202ENST00000635857 IL9RQ01113 521 aa17.11■□□□□ 0.33
LIN28B-202ENST00000635857 ZBTB17Q13105 803 aa17.11■□□□□ 0.33
LIN28B-202ENST00000635857 PTK2BQ14289 1009 aa17.11■□□□□ 0.33
LIN28B-202ENST00000635857 FGL2Q14314 439 aa17.11■□□□□ 0.33
LIN28B-202ENST00000635857 HS1BP3Q53T59 392 aa17.11■□□□□ 0.33
LIN28B-202ENST00000635857 SPOCK2Q92563 424 aa17.11■□□□□ 0.33
LIN28B-202ENST00000635857 AGAP3Q96P47 875 aa17.11■□□□□ 0.33
LIN28B-202ENST00000635857 KCTD5Q9NXV2 234 aa17.11■□□□□ 0.33
LIN28B-202ENST00000635857 SAE1Q9UBE0 346 aaPredicted RBP17.11■□□□□ 0.33
LIN28B-202ENST00000635857 B4GALT6Q9UBX8 382 aa17.11■□□□□ 0.33
LIN28B-202ENST00000635857 COQ6Q9Y2Z9 468 aa17.11■□□□□ 0.33
LIN28B-202ENST00000635857 H3BM21 787 aa17.1■□□□□ 0.33
LIN28B-202ENST00000635857 H7C0C1 242 aa17.1■□□□□ 0.33
LIN28B-202ENST00000635857 SH3BP5O60239 455 aa17.1■□□□□ 0.33
LIN28B-202ENST00000635857 PCDHGA12O60330 932 aa17.1■□□□□ 0.33
LIN28B-202ENST00000635857 ZNF189O75820 626 aaPredicted RBP17.1■□□□□ 0.33
LIN28B-202ENST00000635857 STK10O94804 968 aaKnown RBP17.1■□□□□ 0.33
LIN28B-202ENST00000635857 PECAM1P16284 738 aaPredicted RBP17.1■□□□□ 0.33
LIN28B-202ENST00000635857 PTPN7P35236 360 aa17.1■□□□□ 0.33
LIN28B-202ENST00000635857 CD86P42081 329 aa17.1■□□□□ 0.33
LIN28B-202ENST00000635857 ATP5OP48047 213 aa17.1■□□□□ 0.33
LIN28B-202ENST00000635857 SEMG2Q02383 582 aa17.1■□□□□ 0.33
LIN28B-202ENST00000635857 PDE1CQ14123 709 aaPredicted RBP17.1■□□□□ 0.33
LIN28B-202ENST00000635857 ACOX1Q15067 660 aa17.1■□□□□ 0.33
LIN28B-202ENST00000635857 PRKD1Q15139 912 aaPredicted RBP17.1■□□□□ 0.33
LIN28B-202ENST00000635857 PRAMEF14Q5SWL7 426 aa17.1■□□□□ 0.33
LIN28B-202ENST00000635857 RHBDD1Q8TEB9 315 aa17.1■□□□□ 0.33
LIN28B-202ENST00000635857 VAT1Q99536 393 aa17.1■□□□□ 0.33
LIN28B-202ENST00000635857 TDRD1Q9BXT4 1180 aaKnown RBP17.1■□□□□ 0.33
LIN28B-202ENST00000635857 ADGRE3Q9BY15 652 aa17.1■□□□□ 0.33
LIN28B-202ENST00000635857 CEP41Q9BYV8 373 aa17.1■□□□□ 0.33
LIN28B-202ENST00000635857 PCDH9Q9HC56 1237 aa17.1■□□□□ 0.33
LIN28B-202ENST00000635857 LZTFL1Q9NQ48 299 aa17.1■□□□□ 0.33
LIN28B-202ENST00000635857 KLHL8Q9P2G9 620 aaPredicted RBP17.1■□□□□ 0.33
LIN28B-202ENST00000635857 CAPN6Q9Y6Q1 641 aa17.1■□□□□ 0.33
LIN28B-202ENST00000635857 ASCC3Q8N3C0 2202 aaKnown RBP17.09■□□□□ 0.33
LIN28B-202ENST00000635857 POM121BA6NF01 834 aa17.09■□□□□ 0.33
LIN28B-202ENST00000635857 A8MX80 341 aa17.09■□□□□ 0.33
LIN28B-202ENST00000635857 RAD51BO15315 384 aa17.09■□□□□ 0.33
LIN28B-202ENST00000635857 PCCBP05166 539 aa17.09■□□□□ 0.33
LIN28B-202ENST00000635857 HTR1BP28222 390 aa17.09■□□□□ 0.33
LIN28B-202ENST00000635857 EPHA8P29322 1005 aaPredicted RBP17.09■□□□□ 0.33
LIN28B-202ENST00000635857 PEX5P50542 639 aa17.09■□□□□ 0.33
LIN28B-202ENST00000635857 RPL26P61254 145 aaKnown RBP17.09■□□□□ 0.33
LIN28B-202ENST00000635857 YPEL5P62699 121 aa17.09■□□□□ 0.33
LIN28B-202ENST00000635857 XRCC4Q13426 336 aa17.09■□□□□ 0.33
LIN28B-202ENST00000635857 IRF4Q15306 451 aa17.09■□□□□ 0.33
LIN28B-202ENST00000635857 TEX44Q53QW1 395 aa17.09■□□□□ 0.33
LIN28B-202ENST00000635857 SEL1L2Q5TEA6 688 aa17.09■□□□□ 0.33
LIN28B-202ENST00000635857 DENND2CQ68D51 928 aa17.09■□□□□ 0.33
LIN28B-202ENST00000635857 CCDC70Q6NSX1 233 aa17.09■□□□□ 0.33
LIN28B-202ENST00000635857 LIPIQ6XZB0 460 aa17.09■□□□□ 0.33
LIN28B-202ENST00000635857 PIP4P1Q86T03 277 aa17.09■□□□□ 0.33
LIN28B-202ENST00000635857 PARGQ86W56 976 aa17.09■□□□□ 0.33
LIN28B-202ENST00000635857 SPATS2Q86XZ4 545 aaKnown RBP17.09■□□□□ 0.33
LIN28B-202ENST00000635857 CDKL3Q8IVW4 592 aaPredicted RBP17.09■□□□□ 0.33
LIN28B-202ENST00000635857 TTC13Q8NBP0 860 aa17.09■□□□□ 0.33
LIN28B-202ENST00000635857 LPCAT1Q8NF37 534 aa17.09■□□□□ 0.33
LIN28B-202ENST00000635857 ATL2Q8NHH9 583 aa17.09■□□□□ 0.33
LIN28B-202ENST00000635857 IFT43Q96FT9 208 aa17.09■□□□□ 0.33
LIN28B-202ENST00000635857 SCRN2Q96FV2 425 aa17.09■□□□□ 0.33
LIN28B-202ENST00000635857 QKIQ96PU8 341 aaKnown RBP eCLIP17.09■□□□□ 0.332e-9■■■■■ 31.1
LIN28B-202ENST00000635857 KLF6Q99612 283 aaPredicted RBP17.09■□□□□ 0.33
LIN28B-202ENST00000635857 CDC6Q99741 560 aa17.09■□□□□ 0.33
LIN28B-202ENST00000635857 DNAJC28Q9NX36 388 aa17.09■□□□□ 0.33
LIN28B-202ENST00000635857 PACSIN2Q9UNF0 486 aaPredicted RBP17.09■□□□□ 0.33
LIN28B-202ENST00000635857 RPL26L1Q9UNX3 145 aaKnown RBP17.09■□□□□ 0.33
LIN28B-202ENST00000635857 CHKBQ9Y259 395 aa17.09■□□□□ 0.33
LIN28B-202ENST00000635857 LRRK1Q38SD2 2015 aa17.08■□□□□ 0.33
LIN28B-202ENST00000635857 A0A0U1RQJ8 604 aa17.08■□□□□ 0.32
LIN28B-202ENST00000635857 PSMD11O00231 422 aa17.08■□□□□ 0.32
LIN28B-202ENST00000635857 RECQL5O94762 991 aaPredicted RBP17.08■□□□□ 0.32
LIN28B-202ENST00000635857 CTPS1P17812 591 aa17.08■□□□□ 0.32
LIN28B-202ENST00000635857 IGFALSP35858 605 aa17.08■□□□□ 0.32
LIN28B-202ENST00000635857 RXRGP48443 463 aa17.08■□□□□ 0.32
LIN28B-202ENST00000635857 CCZ1BP86790 482 aa17.08■□□□□ 0.32
LIN28B-202ENST00000635857 CCZ1P86791 482 aaPredicted RBP17.08■□□□□ 0.32
LIN28B-202ENST00000635857 ADCY2Q08462 1091 aa17.08■□□□□ 0.32
LIN28B-202ENST00000635857 RALGDSQ12967 914 aa17.08■□□□□ 0.32
LIN28B-202ENST00000635857 AGERQ15109 404 aa17.08■□□□□ 0.32
LIN28B-202ENST00000635857 NOMO1Q15155 1222 aa17.08■□□□□ 0.32
LIN28B-202ENST00000635857 TP53I13Q8NBR0 393 aaPredicted RBP17.08■□□□□ 0.32
LIN28B-202ENST00000635857 ARRDC2Q8TBH0 407 aa17.08■□□□□ 0.32
LIN28B-202ENST00000635857 HTR3CQ8WXA8 447 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms