RNA–Protein interactions for RNA: ENST00000629350.2

CDK7-215, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-215ENST00000629350 ARHGAP42A6NI28 874 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 A8MX80 341 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 GOLGA6L19H0YKK7 550 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 H3BRJ5 948 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 K7ESM1 405 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 TRAFD1O14545 582 aaPredicted RBP14.38□□□□□ -0.11
CDK7-215ENST00000629350 DAPK3O43293 454 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 MAFKO60675 156 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 PALMO75781 387 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 CSF2P04141 144 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 CR2P20023 1033 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 HNRNPH3P31942 346 aaKnown RBP14.38□□□□□ -0.11
CDK7-215ENST00000629350 HCAR3P49019 387 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 MAXP61244 160 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 IL10RBQ08334 325 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 CYP4F3Q08477 520 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 ZNF211Q13398 564 aaPredicted RBP14.38□□□□□ -0.11
CDK7-215ENST00000629350 C1orf61Q13536 156 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 NFKBIBQ15653 356 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 UGP2Q16851 508 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 DEFB133Q30KQ1 61 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 CCDC122Q5T0U0 273 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 ALKBH5Q6P6C2 394 aaKnown RBP14.38□□□□□ -0.11
CDK7-215ENST00000629350 PARGQ86W56 976 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 SFTPA2Q8IWL1 248 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 DENND6BQ8NEG7 585 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 APOLD1Q96LR9 279 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 NCAPGQ9BPX3 1015 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 LRRC61Q9BV99 259 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 CLPBQ9H078 707 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 SUV39H2Q9H5I1 410 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 SP110Q9HB58 689 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 LUC7L2Q9Y383 392 aaKnown RBP14.38□□□□□ -0.11
CDK7-215ENST00000629350 PCDHGA1Q9Y5H4 931 aa14.38□□□□□ -0.11
CDK7-215ENST00000629350 ARHGEF17Q96PE2 2063 aaPredicted RBP14.38□□□□□ -0.11
CDK7-215ENST00000629350 PMS2P1A4D2B8 440 aa14.37□□□□□ -0.11
CDK7-215ENST00000629350 EIF3CLB5ME19 914 aaKnown RBP14.37□□□□□ -0.11
CDK7-215ENST00000629350 FPGTO14772 594 aa14.37□□□□□ -0.11
CDK7-215ENST00000629350 MAGEC1O60732 1142 aa14.37□□□□□ -0.11
CDK7-215ENST00000629350 CKMT2P17540 419 aa14.37□□□□□ -0.11
CDK7-215ENST00000629350 ACP1P24666 158 aa14.37□□□□□ -0.11
CDK7-215ENST00000629350 RABIFP47224 123 aa14.37□□□□□ -0.11
CDK7-215ENST00000629350 LIG3P49916 1009 aa14.37□□□□□ -0.11
CDK7-215ENST00000629350 CCDC15Q0P6D6 951 aa14.37□□□□□ -0.11
CDK7-215ENST00000629350 TRAF2Q12933 501 aa14.37□□□□□ -0.11
CDK7-215ENST00000629350 TARDBPQ13148 414 aaKnown RBP eCLIP14.37□□□□□ -0.11
CDK7-215ENST00000629350 SGCGQ13326 291 aa14.37□□□□□ -0.11
CDK7-215ENST00000629350 DPYSL3Q14195 570 aa14.37□□□□□ -0.11
CDK7-215ENST00000629350 TMCO4Q5TGY1 634 aa14.37□□□□□ -0.11
CDK7-215ENST00000629350 C19orf48Q6RUI8 117 aa14.37□□□□□ -0.11
CDK7-215ENST00000629350 PSTKQ8IV42 348 aaKnown RBP14.37□□□□□ -0.11
CDK7-215ENST00000629350 PCDH19Q8TAB3 1148 aa14.37□□□□□ -0.11
CDK7-215ENST00000629350 ZNF564Q8TBZ8 553 aaPredicted RBP14.37□□□□□ -0.11
CDK7-215ENST00000629350 FAM71BQ8TC56 605 aa14.37□□□□□ -0.11
CDK7-215ENST00000629350 CXorf40AQ8TE69 158 aa14.37□□□□□ -0.11
CDK7-215ENST00000629350 ASB12Q8WXK4 309 aa14.37□□□□□ -0.11
CDK7-215ENST00000629350 EIF3CQ99613 913 aaKnown RBP14.37□□□□□ -0.11
CDK7-215ENST00000629350 DNAJC7Q99615 494 aa14.37□□□□□ -0.11
CDK7-215ENST00000629350 CHP1Q99653 195 aa14.37□□□□□ -0.11
CDK7-215ENST00000629350 CINPQ9BW66 212 aaPredicted RBP14.37□□□□□ -0.11
CDK7-215ENST00000629350 MRPL47Q9HD33 250 aaKnown RBP14.37□□□□□ -0.11
CDK7-215ENST00000629350 SPTLC3Q9NUV7 552 aa14.37□□□□□ -0.11
CDK7-215ENST00000629350 ATP8A1Q9Y2Q0 1164 aa14.37□□□□□ -0.11
CDK7-215ENST00000629350 OR1A2Q9Y585 309 aa14.37□□□□□ -0.11
CDK7-215ENST00000629350 PCDHB1Q9Y5F3 818 aa14.37□□□□□ -0.11
CDK7-215ENST00000629350 SCN8AQ9UQD0 1980 aa14.36□□□□□ -0.11
CDK7-215ENST00000629350 A0A1W2PNU3 283 aaPredicted RBP14.36□□□□□ -0.11
CDK7-215ENST00000629350 FAM187AA6NFU0 413 aa14.36□□□□□ -0.11
CDK7-215ENST00000629350 TM7SF2O76062 418 aa14.36□□□□□ -0.11
CDK7-215ENST00000629350 PCCBP05166 539 aa14.36□□□□□ -0.11
CDK7-215ENST00000629350 TPM4P67936 248 aa14.36□□□□□ -0.11
CDK7-215ENST00000629350 LBRQ14739 615 aaKnown RBP14.36□□□□□ -0.11
CDK7-215ENST00000629350 ALG11Q2TAA5 492 aa14.36□□□□□ -0.11
CDK7-215ENST00000629350 NCBP2-AS2Q69YL0 99 aa14.36□□□□□ -0.11
CDK7-215ENST00000629350 GUSBP11Q6P575 273 aa14.36□□□□□ -0.11
CDK7-215ENST00000629350 CRTC1Q6UUV9 634 aa14.36□□□□□ -0.11
CDK7-215ENST00000629350 TMCO3Q6UWJ1 677 aa14.36□□□□□ -0.11
CDK7-215ENST00000629350 RFLNAQ6ZTI6 216 aa14.36□□□□□ -0.11
CDK7-215ENST00000629350 VSTM4Q8IW00 320 aa14.36□□□□□ -0.11
CDK7-215ENST00000629350 PHACTR4Q8IZ21 702 aa14.36□□□□□ -0.11
CDK7-215ENST00000629350 LMX1AQ8TE12 382 aa14.36□□□□□ -0.11
CDK7-215ENST00000629350 TEKT4Q8WW24 435 aa14.36□□□□□ -0.11
CDK7-215ENST00000629350 PDXPQ96GD0 296 aa14.36□□□□□ -0.11
CDK7-215ENST00000629350 PSKH2Q96QS6 385 aa14.36□□□□□ -0.11
CDK7-215ENST00000629350 CCDC86Q9H6F5 360 aaKnown RBP14.36□□□□□ -0.11
CDK7-215ENST00000629350 NOD2Q9HC29 1040 aa14.36□□□□□ -0.11
CDK7-215ENST00000629350 PCDHGC4Q9Y5F7 938 aa14.36□□□□□ -0.11
CDK7-215ENST00000629350 ZFC3H1O60293 1989 aaKnown RBP14.35□□□□□ -0.11
CDK7-215ENST00000629350 TMEM110-MUSTN1A8MSY1 372 aa14.35□□□□□ -0.11
CDK7-215ENST00000629350 AQP9O43315 295 aa14.35□□□□□ -0.11
CDK7-215ENST00000629350 TLX3O43711 291 aaPredicted RBP14.35□□□□□ -0.11
CDK7-215ENST00000629350 PROSCO94903 275 aa14.35□□□□□ -0.11
CDK7-215ENST00000629350 CKMT1AP12532 417 aa14.35□□□□□ -0.11
CDK7-215ENST00000629350 LHCGRP22888 699 aa14.35□□□□□ -0.11
CDK7-215ENST00000629350 CSNK1DP48730 415 aa14.35□□□□□ -0.11
CDK7-215ENST00000629350 SCNN1BP51168 640 aa14.35□□□□□ -0.11
CDK7-215ENST00000629350 ADKP55263 362 aaKnown RBP14.35□□□□□ -0.11
CDK7-215ENST00000629350 CDH6P55285 790 aa14.35□□□□□ -0.11
CDK7-215ENST00000629350 GBE1Q04446 702 aa14.35□□□□□ -0.11
CDK7-215ENST00000629350 PIGHQ14442 188 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms