RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 CKAP5Q14008 2032 aa6.49□□□□□ -1.37
TCF4-249ENST00000625716 SDK1Q7Z5N4 2213 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 A0A087X0T9 212 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 A0A1W2PQU0 124 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 MEGF11A6BM72 1044 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 C16orf96A6NNT2 1141 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 PRAMEF26H0Y7S4 382 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 TLR4O00206 839 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 DFFAO00273 331 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 KCNK3O14649 394 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 GIPC1O14908 333 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 FLRT2O43155 660 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 LATO43561 262 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 SH3BP5O60239 455 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 FZD6O60353 706 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 LRCH4O75427 683 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 TNFRSF21O75509 655 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 ZNF821O75541 412 aaPredicted RBP6.48□□□□□ -1.37
TCF4-249ENST00000625716 PALMO75781 387 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 TMCC1O94876 653 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 TRIM16O95361 564 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 CYP1A2P05177 515 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 ITGAVP06756 1048 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 H2AFZP0C0S5 128 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 FAM228BP0C875 321 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 ADRB3P13945 408 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 CD59P13987 128 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 ERCC2P18074 760 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 EIF4A3P38919 411 aaKnown RBP6.48□□□□□ -1.37
TCF4-249ENST00000625716 CTSKP43235 329 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 ARRB1P49407 418 aaPredicted RBP6.48□□□□□ -1.37
TCF4-249ENST00000625716 CCT8P50990 548 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 PPP2CBP62714 309 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 RPS21P63220 83 aaKnown RBP6.48□□□□□ -1.37
TCF4-249ENST00000625716 PPP2CAP67775 309 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 OVGP1Q12889 678 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 KRT81Q14533 505 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 GRM3Q14832 879 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 TRIP6Q15654 476 aaKnown RBP6.48□□□□□ -1.37
TCF4-249ENST00000625716 CA9Q16790 459 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 HS1BP3Q53T59 392 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 ZNF805Q5CZA5 627 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 KCNT1Q5JUK3 1230 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 ZFYVE27Q5T4F4 411 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 PIP5KL1Q5T9C9 394 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 KIAA1161Q6NSJ0 714 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 GDPD4Q6W3E5 623 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 H2AFVQ71UI9 128 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 PIP4P1Q86T03 277 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 TTC7BQ86TV6 843 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 ZSCAN30Q86W11 494 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 HORMAD1Q86X24 394 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 CNGA4Q8IV77 575 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 VSTM4Q8IW00 320 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 OXR1Q8N573 874 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 MFSD2AQ8NA29 543 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 OR6K2Q8NGY2 324 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 NSMCE1Q8WV22 266 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 RAB7BQ96AH8 199 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 ARRDC3Q96B67 414 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 ARHGEF26Q96DR7 871 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 CELF6Q96J87 481 aaKnown RBP6.48□□□□□ -1.37
TCF4-249ENST00000625716 CCDC42Q96M95 316 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 CDC6Q99741 560 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 TRIM7Q9C029 511 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 TRIM5Q9C035 493 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 SLC39A8Q9C0K1 460 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 SP110Q9HB58 689 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 IL21RQ9HBE5 538 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 LATS2Q9NRM7 1088 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 ARHGAP20Q9P2F6 1191 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 UBA2Q9UBT2 640 aaPredicted RBP6.48□□□□□ -1.37
TCF4-249ENST00000625716 IPO11Q9UI26 975 aaKnown RBP6.48□□□□□ -1.37
TCF4-249ENST00000625716 FOXD3Q9UJU5 478 aaPredicted RBP6.48□□□□□ -1.37
TCF4-249ENST00000625716 PCDHGB2Q9Y5G2 931 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 ACTL7AQ9Y615 435 aa6.48□□□□□ -1.37
TCF4-249ENST00000625716 NUP205Q92621 2012 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 ZNF292O60281 2723 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 SPAARA0A1B0GVQ0 90 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 SSU72P8A0A1W2PR75 194 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 AKR1B15C9JRZ8 316 aaPredicted RBP6.47□□□□□ -1.37
TCF4-249ENST00000625716 H0Y8X5 98 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 SLC31A1O15431 190 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 YKT6O15498 198 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 TSPAN6O43657 245 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 AP1G1O43747 822 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 PRAMEF11O60813 436 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 GJB3O75712 270 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 CD160O95971 181 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 UGT2B4P06133 528 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 HNRNPA2B1P22626 353 aaKnown RBP6.47□□□□□ -1.37
TCF4-249ENST00000625716 HNRNPH3P31942 346 aaKnown RBP6.47□□□□□ -1.37
TCF4-249ENST00000625716 GKP32189 559 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 SERPINB6P35237 376 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 GJC1P36383 396 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 GRK6P43250 576 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 PAPOLAP51003 745 aaKnown RBP6.47□□□□□ -1.37
TCF4-249ENST00000625716 RENBPP51606 427 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 IL9RQ01113 521 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 BNC1Q01954 994 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms