RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 IRGCQ6NXR0 463 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 LRRC74BQ6ZQY2 392 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 ARPINQ7Z6K5 226 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 ZNF398Q8TD17 642 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 SNRNP27Q8WVK2 155 aaKnown RBP9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 CNBD2Q96M20 576 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 KLHL5Q96PQ7 755 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 TMEM216Q9P0N5 145 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 AP3M1Q9Y2T2 418 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 NFKBIEO00221 500 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 PDE5AO76074 875 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 MLYCDO95822 493 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 NR2F1P10589 423 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 ICAM3P32942 547 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 TALDO1P37837 337 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 RASA2Q15283 850 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 TIGD5Q53EQ6 642 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 TPGS2Q68CL5 300 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 GDF6Q6KF10 455 aaPredicted RBP9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 SH3BP5LQ7L8J4 393 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 ZNF786Q8N393 782 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 OR52L1Q8NGH7 329 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 OR4L1Q8NH43 312 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 ETNPPLQ8TBG4 499 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 ARHGAP9Q9BRR9 750 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 TMEM120AQ9BXJ8 343 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 EPB41L4BQ9H329 900 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 LIMD1Q9UGP4 676 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 CROTQ9UKG9 612 aa9.83□□□□□ -0.84
CLTCL1-211ENST00000621271 ATXN2Q99700 1313 aaKnown RBP9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 GLYATL1P3A0A0U1RQE8 302 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 A0A1B0GVM2 712 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 TCAF2A6NFQ2 919 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 CHADO15335 359 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 TEX28O15482 410 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 POP4O95707 220 aaKnown RBP9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 PSMC3P17980 439 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 MTAPQ13126 283 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 LRRC32Q14392 662 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 NPNTQ6UXI9 565 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 PTGR2Q8N8N7 351 aaPredicted RBP9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 SLC22A17Q8WUG5 538 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 SEPHS2Q99611 448 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 HEPHQ9BQS7 1158 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 KLHL4Q9C0H6 718 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 NEUROD4Q9HD90 331 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 PALMDQ9NP74 551 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 INVSQ9Y283 1065 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 TMEM191CA6NGB0 347 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 MCIDASD6RGH6 385 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 CLDN4O14493 209 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 ATG7O95352 703 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 CLPTM1O96005 669 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 TFPIP10646 304 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 ETS1P14921 441 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 HOXC12P31275 282 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 RFC2P35250 354 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 SOX6P35712 828 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 POLD2P49005 469 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 ESRP1Q6NXG1 681 aaKnown RBP9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 DENND6AQ8IWF6 608 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 CLP1Q92989 425 aaKnown RBP9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 ACDQ96AP0 544 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 RMND5BQ96G75 393 aaPredicted RBP9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 AIF1LQ9BQI0 150 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 PDZD7Q9H5P4 517 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 NCDNQ9UBB6 729 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 SLC45A1Q9Y2W3 748 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 BCLAF3A2AJT9 711 aaKnown RBP9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 SOWAHBA6NEL2 793 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 FFAR3O14843 346 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 GPR42O15529 346 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 RPL4P36578 427 aaKnown RBP9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 NUP62P37198 522 aaPredicted RBP9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 TAPT1Q6NXT6 567 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 CDC73Q6P1J9 531 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 RFWD3Q6PCD5 774 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 EID3Q8N140 333 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 WFIKKN2Q8TEU8 576 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 IRGQQ8WZA9 623 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 BTBD10Q9BSF8 475 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 WRAP53Q9BUR4 548 aaKnown RBP9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 NIFKQ9BYG3 293 aaKnown RBP9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 VPS45Q9NRW7 570 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 HCN3Q9P1Z3 774 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 TSC22D4Q9Y3Q8 395 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 ASTN1O14525 1302 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 KRT75O95678 551 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 CCNE2O96020 404 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 WNT3AP56704 352 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 PDGFRLQ15198 375 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 KYQ8NBH2 561 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 PLD4Q96BZ4 506 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 APOPT1Q96IL0 206 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 RBPJLQ9UBG7 517 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 CHKBQ9Y259 395 aa9.82□□□□□ -0.84
CLTCL1-211ENST00000621271 FZD9O00144 591 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 CALCAP01258 141 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 HSMCR30P0CW71 290 aa9.81□□□□□ -0.84
CLTCL1-211ENST00000621271 CDH4P55283 916 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms