RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 MEGF6O75095 1541 aa6.9□□□□□ -1.3
CLCN3-211ENST00000613795 RGS14O43566 566 aa6.9□□□□□ -1.3
CLCN3-211ENST00000613795 TULP3O75386 442 aa6.9□□□□□ -1.3
CLCN3-211ENST00000613795 FADS2O95864 444 aaKnown RBP6.9□□□□□ -1.3
CLCN3-211ENST00000613795 HMBSP08397 361 aa6.9□□□□□ -1.3
CLCN3-211ENST00000613795 SERPINF2P08697 491 aa6.9□□□□□ -1.3
CLCN3-211ENST00000613795 MZF1P28698 734 aaPredicted RBP6.9□□□□□ -1.3
CLCN3-211ENST00000613795 CDK18Q07002 472 aa6.9□□□□□ -1.3
CLCN3-211ENST00000613795 PEX6Q13608 980 aa6.9□□□□□ -1.3
CLCN3-211ENST00000613795 FSCN1Q16658 493 aaKnown RBP6.9□□□□□ -1.3
CLCN3-211ENST00000613795 SHROOM1Q2M3G4 852 aaPredicted RBP6.9□□□□□ -1.3
CLCN3-211ENST00000613795 HKDC1Q2TB90 917 aa6.9□□□□□ -1.3
CLCN3-211ENST00000613795 HMBOX1Q6NT76 420 aa6.9□□□□□ -1.3
CLCN3-211ENST00000613795 KDELC2Q7Z4H8 507 aa6.9□□□□□ -1.3
CLCN3-211ENST00000613795 DMRTB1Q96MA1 342 aa6.9□□□□□ -1.3
CLCN3-211ENST00000613795 PI4K2AQ9BTU6 479 aa6.9□□□□□ -1.3
CLCN3-211ENST00000613795 ABI2Q9NYB9 513 aaPredicted RBP6.9□□□□□ -1.3
CLCN3-211ENST00000613795 PLA2G4CQ9UP65 541 aa6.9□□□□□ -1.3
CLCN3-211ENST00000613795 C3P01024 1663 aa6.9□□□□□ -1.3
CLCN3-211ENST00000613795 ACKR2O00590 384 aa6.9□□□□□ -1.3
CLCN3-211ENST00000613795 SPTLC1O15269 473 aa6.9□□□□□ -1.3
CLCN3-211ENST00000613795 CPSF4O95639 269 aaKnown RBP6.9□□□□□ -1.3
CLCN3-211ENST00000613795 PGK1P00558 417 aa6.9□□□□□ -1.3
CLCN3-211ENST00000613795 HMGCRP04035 888 aa6.9□□□□□ -1.3
CLCN3-211ENST00000613795 GRIA4P48058 902 aa6.9□□□□□ -1.3
CLCN3-211ENST00000613795 AIF1P55008 147 aa6.9□□□□□ -1.3
CLCN3-211ENST00000613795 SLC1A5Q15758 541 aa6.9□□□□□ -1.3
CLCN3-211ENST00000613795 OFCC1Q8IZS5 231 aa6.9□□□□□ -1.3
CLCN3-211ENST00000613795 EFCAB3Q8N7B9 438 aa6.9□□□□□ -1.3
CLCN3-211ENST00000613795 ZNF717Q9BY31 904 aaPredicted RBP6.9□□□□□ -1.3
CLCN3-211ENST00000613795 ABHD16BQ9H3Z7 469 aa6.9□□□□□ -1.3
CLCN3-211ENST00000613795 SLC17A7Q9P2U7 560 aa6.9□□□□□ -1.3
CLCN3-211ENST00000613795 SPASTQ9UBP0 616 aa6.9□□□□□ -1.3
CLCN3-211ENST00000613795 PNMA8BQ9ULN7 279 aaPredicted RBP6.9□□□□□ -1.3
CLCN3-211ENST00000613795 BCL9O00512 1426 aa6.9□□□□□ -1.3
CLCN3-211ENST00000613795 A0A087X0B3 334 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 A0A1W2PPM1 405 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 H3BN98 237 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 H7C2Y5 167 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 QSOX1O00391 747 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 ITM2AO43736 263 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 NRP2O60462 931 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 XYLBO75191 536 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 PGRP06401 933 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 PCSK2P16519 638 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 MYL9P24844 172 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 IDH2P48735 452 aaKnown RBP6.9□□□□□ -1.31
CLCN3-211ENST00000613795 SLC7A2P52569 658 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 GRIK4Q16099 956 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 HSD17B12Q53GQ0 312 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 EMC10Q5UCC4 262 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 TLDC1Q6P9B6 456 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 ADGRD1Q6QNK2 874 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 SAPCD2Q86UD0 394 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 BRSK2Q8IWQ3 736 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 TOP1MTQ969P6 601 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 HAVCR1Q96D42 359 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 SLC47A1Q96FL8 570 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 GTPBP2Q9BX10 602 aaKnown RBP6.9□□□□□ -1.31
CLCN3-211ENST00000613795 CORO2BQ9UQ03 480 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 VIRMAQ69YN4 1812 aaKnown RBP6.9□□□□□ -1.31
CLCN3-211ENST00000613795 CYP3A7-CYP3A51PA0A087WV96 503 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 BCKDKO14874 412 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 RPLP0P05388 317 aaKnown RBP6.9□□□□□ -1.31
CLCN3-211ENST00000613795 PRKACBP22694 351 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 CYP3A7P24462 503 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 MGAT1P26572 445 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 SULT2A1Q06520 285 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 VWA5B1Q5TIE3 1220 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 CXXC5Q7LFL8 322 aaKnown RBP6.9□□□□□ -1.31
CLCN3-211ENST00000613795 PGBD3Q8N328 593 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 CBR4Q8N4T8 237 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 C12orf50Q8NA57 414 aaPredicted RBP6.9□□□□□ -1.31
CLCN3-211ENST00000613795 SLC44A1Q8WWI5 657 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 IPCEF1Q8WWN9 437 aaPredicted RBP6.9□□□□□ -1.31
CLCN3-211ENST00000613795 C18orf25Q96B23 403 aaPredicted RBP6.9□□□□□ -1.31
CLCN3-211ENST00000613795 REXO5Q96IC2 774 aaKnown RBP6.9□□□□□ -1.31
CLCN3-211ENST00000613795 PANX3Q96QZ0 392 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 APOL2Q9BQE5 337 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 APOL5Q9BWW9 433 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 TDRD1Q9BXT4 1180 aaKnown RBP6.9□□□□□ -1.31
CLCN3-211ENST00000613795 CRISPLD1Q9H336 500 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 TMEM138Q9NPI0 162 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 PRDM8Q9NQV8 689 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 CISHQ9NSE2 258 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 TBC1D14Q9P2M4 693 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 PCDHGC3Q9UN70 934 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 COL1A2P08123 1366 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 MROH1Q8NDA8 1641 aa6.9□□□□□ -1.31
CLCN3-211ENST00000613795 A0A0J9YVX5 310 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 KPNA5O15131 536 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 TBX1O43435 398 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 MYCP01106 439 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-211ENST00000613795 GSTM1P09488 218 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 CYP2F1P24903 491 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 SLC22A16Q86VW1 577 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 MAP4K3Q8IVH8 894 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 IQCF2Q8IXL9 164 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 HTR3CQ8WXA8 447 aa6.89□□□□□ -1.31
CLCN3-211ENST00000613795 MED11Q9P086 117 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms