RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 GAD1Q99259 594 aa17.48■□□□□ 0.39
HMGXB3-206ENST00000613459 TAS2R14Q9NYV8 317 aa17.48■□□□□ 0.39
HMGXB3-206ENST00000613459 CLIC5Q9NZA1 410 aa17.48■□□□□ 0.39
HMGXB3-206ENST00000613459 SLC15A5A6NIM6 579 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 FGF19O95750 216 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 DBTP11182 482 aaKnown RBP17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 BMP7P18075 431 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 MTTPP55157 894 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 INHBEP58166 350 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 C5orf22Q49AR2 442 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 PIGZQ86VD9 579 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 AHI1Q8N157 1196 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 LEMD2Q8NC56 503 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 ADCY4Q8NFM4 1077 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 MFSD14AQ96MC6 490 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 NDOR1Q9UHB4 597 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 EDF1O60869 148 aaKnown RBP17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 PEX11AO75192 247 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 ENTPD5O75356 428 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 DLG4P78352 724 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 GPR107Q5VW38 600 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 NPNTQ6UXI9 565 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 STRADAQ7RTN6 431 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 DEFB128Q7Z7B8 93 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 TRAPPC12Q8WVT3 735 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 SAMD4AQ9UPU9 718 aaKnown RBP17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 WBP11Q9Y2W2 641 aaKnown RBP17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 HBS1LQ9Y450 684 aaKnown RBP17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 WNT10BO00744 389 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 UGT2B11O75310 529 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 CST1P01037 141 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 CDK9P50750 372 aaKnown RBP17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 CCNIQ14094 377 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 TCEAL5Q5H9L2 206 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 USP50Q70EL3 339 aaPredicted RBP17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 C16orf59Q7L2K0 433 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 TRABD2AQ86V40 505 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 CDT1Q9H211 546 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 SNX15Q9NRS6 342 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 PTGFRNQ9P2B2 879 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 SSR3Q9UNL2 185 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 LRRIQ1Q96JM4 1722 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 AP3D1O14617 1153 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 SLC5A9Q2M3M2 681 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 DDI2Q5TDH0 399 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 FAM46CQ5VWP2 391 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 RAP1GAP2Q684P5 730 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 SPESP1Q6UW49 350 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 MARK4Q96L34 752 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 TMEM39AQ9NV64 488 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 DEPDC5O75140 1603 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 DNAJA2O60884 412 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 KHDRBS3O75525 346 aaKnown RBP17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 RGS20O76081 388 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 CAPGP40121 348 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 MRPS5P82675 430 aaKnown RBP17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 MTAPQ13126 283 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 PACS1Q6VY07 963 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 RASGEF1CQ8N431 466 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 TEX47Q8TBZ9 253 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 PDCD10Q9BUL8 212 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 RHOJQ9H4E5 214 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 PRDM12Q9H4Q4 367 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 FBXO5Q9UKT4 447 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 KCNE2Q9Y6J6 123 aa17.47■□□□□ 0.39
HMGXB3-206ENST00000613459 OR6C75A6NL08 312 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 CHURC1-FNTBB4DL54 471 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 ACSL4O60488 711 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 GJB6O95452 261 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 RPL38P63173 70 aaKnown RBP17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 PTPRNQ16849 979 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 DCLRE1AQ6PJP8 1040 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 DOK6Q6PKX4 331 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 CHPFQ8IZ52 775 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 KCTD4Q8WVF5 259 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 HAS1Q92839 578 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 MTFMTQ96DP5 389 aaKnown RBP17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 OXCT2Q9BYC2 517 aaPredicted RBP17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 TRIM39Q9HCM9 518 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 HMX1Q9NP08 348 aaPredicted RBP17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 GALNT8Q9NY28 637 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 COQ6Q9Y2Z9 468 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 A0A1W2PQ67 120 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 SPTLC1O15269 473 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 TMCC2O75069 709 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 NR2F1P10589 423 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 VEGFAP15692 232 aaPredicted RBP17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 PTGES3Q15185 160 aaKnown RBP17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 ZIK1Q3SY52 487 aaPredicted RBP17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 GIPC3Q8TF64 312 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 SLC47A1Q96FL8 570 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 DDX4Q9NQI0 724 aaKnown RBP17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 PTPRAP18433 802 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 CDK18Q07002 472 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 BICRALQ6AI39 1079 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 RD3Q7Z3Z2 195 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 TOR4AQ9NXH8 423 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 TRPS1Q9UHF7 1281 aa17.46■□□□□ 0.39
HMGXB3-206ENST00000613459 ST3GAL5Q9UNP4 418 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms