RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 ZNF385DQ9H6B1 395 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 PIDD1Q9HB75 910 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 VWA7Q9Y334 891 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 CCDC162PA2VCL2 907 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 WASH4PA8MWX3 477 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 RNASEH1O60930 286 aaKnown RBP14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 ATF6P18850 670 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 ATP5F1P24539 256 aaPredicted RBP14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 TM4SF4P48230 202 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 LEPRP48357 1165 aaKnown RBP14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 CDKN1CP49918 316 aaPredicted RBP14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 NDST2P52849 883 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 MAP3K21Q5TCX8 1036 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 CUZD1Q86UP6 607 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 ABI1Q8IZP0 508 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 ATP6V0D2Q8N8Y2 350 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 CD99L2Q8TCZ2 262 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 WBP2Q969T9 261 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 ANKRD27Q96NW4 1050 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 ZBED2Q9BTP6 218 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 GKN1Q9NS71 199 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 MID2Q9UJV3 735 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 CORO1CQ9ULV4 474 aaPredicted RBP14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 A0A1B0GTL3 188 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 TCAF2A6NFQ2 919 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 GPR39O43194 453 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 H2AFYO75367 372 aaKnown RBP14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 TRPA1O75762 1119 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 SUPT7LO94864 414 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 DNAJB2P25686 324 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 TIAL1Q01085 375 aaKnown RBP eCLIP14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 SERINC3Q13530 473 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 TRIP4Q15650 581 aaPredicted RBP14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 KYQ8NBH2 561 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 NSUN5Q96P11 429 aaKnown RBP14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 TUBGCP5Q96RT8 1024 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 ARNT2Q9HBZ2 717 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 MRM3Q9HC36 420 aaKnown RBP14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 CCDC167Q9P0B6 97 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 TSR3Q9UJK0 312 aaKnown RBP14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 SPO11Q9Y5K1 396 aa14.14□□□□□ -0.15
PCDHGA3-202ENST00000612467 PLXNA3P51805 1871 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 IGLV3-10A0A075B6K4 115 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 A0A1W2PQ45 241 aaPredicted RBP14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 A0A1W2PQY0 241 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 MROH6A6NGR9 719 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 TSPAN3O60637 253 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 ZNF189O75820 626 aaPredicted RBP14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 EOMESO95936 686 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 LTA4HP09960 611 aaKnown RBP14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 THRAP10827 490 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 IRF1P10914 325 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 COL6A2P12110 1019 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 PFKPQ01813 784 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 FAM83EQ2M2I3 478 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 CYHR1Q6ZMK1 362 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 SPPL2BQ8TCT7 592 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 C3orf30Q96M34 536 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 KCNA7Q96RP8 456 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 SLC39A3Q9BRY0 314 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 ZBTB26Q9HCK0 441 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 IKZF3Q9UKT9 509 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 A0A087X1B8 175 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 H3BMM5 538 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 FKBP6O75344 327 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 IPO13O94829 963 aaKnown RBP14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 TACR2P21452 398 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 FOXA1P55317 472 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 NKX3-2P78367 333 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 NRG1Q02297 640 aaPredicted RBP14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 ZNF235Q14590 738 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 FOXB2Q5VYV0 432 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 METTL21CQ5VZV1 264 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 IRGCQ6NXR0 463 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 SDCCAG8Q86SQ7 713 aaPredicted RBP14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 ISCA2Q86U28 154 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 PTCD2Q8WV60 388 aaKnown RBP14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 BHMTQ93088 406 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 IFT43Q96FT9 208 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 FUBP3Q96I24 572 aaKnown RBP eCLIP14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 PRKD2Q9BZL6 878 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 WDR41Q9HAD4 459 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 TRPC7Q9HCX4 862 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 STARD7Q9NQZ5 370 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 GALPQ9UBC7 116 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 PCDHGB4Q9UN71 923 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 FAM50BQ9Y247 325 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 PCDHGB5Q9Y5G0 923 aa14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 ZFP37Q9Y6Q3 630 aaPredicted RBP14.13□□□□□ -0.15
PCDHGA3-202ENST00000612467 INPPL1O15357 1258 aa14.12□□□□□ -0.15
PCDHGA3-202ENST00000612467 CST5P28325 142 aaPredicted RBP14.12□□□□□ -0.15
PCDHGA3-202ENST00000612467 FAM189BP81408 668 aa14.12□□□□□ -0.15
PCDHGA3-202ENST00000612467 RALGDSQ12967 914 aa14.12□□□□□ -0.15
PCDHGA3-202ENST00000612467 GRAMD1BQ3KR37 738 aa14.12□□□□□ -0.15
PCDHGA3-202ENST00000612467 CMPK2Q5EBM0 449 aa14.12□□□□□ -0.15
PCDHGA3-202ENST00000612467 PITRM1Q5JRX3 1037 aa14.12□□□□□ -0.15
PCDHGA3-202ENST00000612467 FUT10Q6P4F1 479 aa14.12□□□□□ -0.15
PCDHGA3-202ENST00000612467 C16orf59Q7L2K0 433 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms