RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 AIM2O14862 343 aa14.79□□□□□ -0.04
CDH1-213ENST00000612417 RNASEH1O60930 286 aaKnown RBP14.79□□□□□ -0.04
CDH1-213ENST00000612417 COQ9O75208 318 aa14.79□□□□□ -0.04
CDH1-213ENST00000612417 SMIM24O75264 130 aa14.79□□□□□ -0.04
CDH1-213ENST00000612417 VNN2O95498 520 aa14.79□□□□□ -0.04
CDH1-213ENST00000612417 CD151P48509 253 aa14.79□□□□□ -0.04
CDH1-213ENST00000612417 POU4F1Q01851 419 aa14.79□□□□□ -0.04
CDH1-213ENST00000612417 DLG1Q12959 904 aa14.79□□□□□ -0.04
CDH1-213ENST00000612417 PPM1LQ5SGD2 360 aa14.79□□□□□ -0.04
CDH1-213ENST00000612417 OGFRL1Q5TC84 451 aaPredicted RBP14.79□□□□□ -0.04
CDH1-213ENST00000612417 BNC2Q6ZN30 1099 aaPredicted RBP14.79□□□□□ -0.04
CDH1-213ENST00000612417 PGAM4Q8N0Y7 254 aa14.79□□□□□ -0.04
CDH1-213ENST00000612417 ZNF483Q8TF39 744 aaPredicted RBP14.79□□□□□ -0.04
CDH1-213ENST00000612417 NXNL1Q96CM4 212 aa14.79□□□□□ -0.04
CDH1-213ENST00000612417 MOCOSQ96EN8 888 aa14.79□□□□□ -0.04
CDH1-213ENST00000612417 MRGPRX2Q96LB1 330 aa14.79□□□□□ -0.04
CDH1-213ENST00000612417 TUBGCP5Q96RT8 1024 aa14.79□□□□□ -0.04
CDH1-213ENST00000612417 CLIC5Q9NZA1 410 aa14.79□□□□□ -0.04
CDH1-213ENST00000612417 NCKIPSDQ9NZQ3 722 aa14.79□□□□□ -0.04
CDH1-213ENST00000612417 MTRRQ9UBK8 725 aa14.79□□□□□ -0.04
CDH1-213ENST00000612417 MRPL42Q9Y6G3 142 aaKnown RBP14.79□□□□□ -0.04
CDH1-213ENST00000612417 GREB1Q4ZG55 1949 aa14.79□□□□□ -0.04
CDH1-213ENST00000612417 PLXNA3P51805 1871 aa14.79□□□□□ -0.04
CDH1-213ENST00000612417 WASH4PA8MWX3 477 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 CD1EP15812 388 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 PGGT1BP53609 377 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 TAF10Q12962 218 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 CNGA3Q16281 694 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 SH2D4BQ5SQS7 431 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 LPCAT4Q643R3 524 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 ZNF513Q8N8E2 541 aaPredicted RBP14.78□□□□□ -0.04
CDH1-213ENST00000612417 RTL3Q8N8U3 475 aaKnown RBP14.78□□□□□ -0.04
CDH1-213ENST00000612417 FATE1Q969F0 183 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 FCRL2Q96LA5 508 aaPredicted RBP14.78□□□□□ -0.04
CDH1-213ENST00000612417 SH3GL3Q99963 347 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 FSD1LQ9BXM9 530 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 ARNT2Q9HBZ2 717 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 MRGBPQ9NV56 204 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 TRPC5OSA6NMA1 111 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 MOCS2O96007 188 aaPredicted RBP14.78□□□□□ -0.04
CDH1-213ENST00000612417 SOD2P04179 222 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 JUNP05412 331 aaKnown RBP14.78□□□□□ -0.04
CDH1-213ENST00000612417 LAG3P18627 525 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 AQP4P55087 323 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 TAS2R39P59534 338 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 MED21Q13503 144 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 GRM2Q14416 872 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 ZNF460Q14592 562 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 TRIP10Q15642 601 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 ZNF423Q2M1K9 1284 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 ZNF470Q6ECI4 717 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 SLC8B1Q6J4K2 584 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 ZFP1Q6P2D0 407 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 CMTR2Q8IYT2 770 aaKnown RBP14.78□□□□□ -0.04
CDH1-213ENST00000612417 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.78□□□□□ -0.04
CDH1-213ENST00000612417 EFCAB3Q8N7B9 438 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 TXNDC5Q8NBS9 432 aaKnown RBP14.78□□□□□ -0.04
CDH1-213ENST00000612417 SPATA17Q96L03 361 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 IL23AQ9NPF7 189 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 TLR8Q9NR97 1041 aaKnown RBP14.78□□□□□ -0.04
CDH1-213ENST00000612417 NDFIP2Q9NV92 336 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 RBM22Q9NW64 420 aaKnown RBP eCLIP14.78□□□□□ -0.04
CDH1-213ENST00000612417 SPG21Q9NZD8 308 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 PRKAG2Q9UGJ0 569 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 SLC2A6Q9UGQ3 507 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 BCAP29Q9UHQ4 241 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 FBXO5Q9UKT4 447 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 TBC1D30Q9Y2I9 924 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 BACE2Q9Y5Z0 518 aa14.78□□□□□ -0.04
CDH1-213ENST00000612417 KCNU1A8MYU2 1149 aa14.77□□□□□ -0.04
CDH1-213ENST00000612417 EFEMP2O95967 443 aa14.77□□□□□ -0.04
CDH1-213ENST00000612417 ATP5F1P24539 256 aaPredicted RBP14.77□□□□□ -0.04
CDH1-213ENST00000612417 THOP1P52888 689 aa14.77□□□□□ -0.04
CDH1-213ENST00000612417 EFEMP1Q12805 493 aa14.77□□□□□ -0.04
CDH1-213ENST00000612417 GALNT7Q86SF2 657 aa14.77□□□□□ -0.04
CDH1-213ENST00000612417 SDCCAG8Q86SQ7 713 aaPredicted RBP14.77□□□□□ -0.04
CDH1-213ENST00000612417 SLC39A11Q8N1S5 342 aa14.77□□□□□ -0.04
CDH1-213ENST00000612417 PQLC1Q8N2U9 271 aa14.77□□□□□ -0.04
CDH1-213ENST00000612417 HIPK4Q8NE63 616 aa14.77□□□□□ -0.04
CDH1-213ENST00000612417 RCN3Q96D15 328 aa14.77□□□□□ -0.04
CDH1-213ENST00000612417 ELMO2Q96JJ3 720 aa14.77□□□□□ -0.04
CDH1-213ENST00000612417 SERPINB11Q96P15 392 aa14.77□□□□□ -0.04
CDH1-213ENST00000612417 RANBP9Q96S59 729 aa14.77□□□□□ -0.04
CDH1-213ENST00000612417 ATP13A1Q9HD20 1204 aa14.77□□□□□ -0.04
CDH1-213ENST00000612417 ACSS2Q9NR19 701 aa14.77□□□□□ -0.04
CDH1-213ENST00000612417 IL37Q9NZH6 218 aa14.77□□□□□ -0.04
CDH1-213ENST00000612417 COL4A6Q14031 1691 aa14.77□□□□□ -0.04
CDH1-213ENST00000612417 SLC38A8A6NNN8 435 aa14.77□□□□□ -0.05
CDH1-213ENST00000612417 E9PAM4 449 aa14.77□□□□□ -0.05
CDH1-213ENST00000612417 PMPCBO75439 489 aa14.77□□□□□ -0.05
CDH1-213ENST00000612417 BAIAP3O94812 1187 aa14.77□□□□□ -0.05
CDH1-213ENST00000612417 ZCCHC18P0CG32 403 aa14.77□□□□□ -0.05
CDH1-213ENST00000612417 VCLP18206 1134 aa14.77□□□□□ -0.05
CDH1-213ENST00000612417 TUFMP49411 452 aaKnown RBP14.77□□□□□ -0.05
CDH1-213ENST00000612417 SLC14A2Q15849 920 aa14.77□□□□□ -0.05
CDH1-213ENST00000612417 LRRC36Q1X8D7 754 aa14.77□□□□□ -0.05
CDH1-213ENST00000612417 C10orf120Q5SQS8 335 aa14.77□□□□□ -0.05
CDH1-213ENST00000612417 NEPROQ6NW34 567 aa14.77□□□□□ -0.05
CDH1-213ENST00000612417 KDELC1Q6UW63 502 aa14.77□□□□□ -0.05
CDH1-213ENST00000612417 RNF168Q8IYW5 571 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms