RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130	CYGB	Q8WWM9	190 aa		13.81	□□□□□ -0.2
UBE2F-223	ENST00000612130	HNRNPAB	Q99729	332 aa	Known RBP	13.81	□□□□□ -0.2
UBE2F-223	ENST00000612130	SLC39A3	Q9BRY0	314 aa		13.81	□□□□□ -0.2
UBE2F-223	ENST00000612130	TDRD1	Q9BXT4	1180 aa	Known RBP	13.81	□□□□□ -0.2
UBE2F-223	ENST00000612130	DUSP16	Q9BY84	665 aa		13.81	□□□□□ -0.2
UBE2F-223	ENST00000612130	SEZ6L	Q9BYH1	1024 aa		13.81	□□□□□ -0.2
UBE2F-223	ENST00000612130	UNK	Q9C0B0	810 aa	Known RBP	13.81	□□□□□ -0.2
UBE2F-223	ENST00000612130	MUC3B	Q9H195	1237 aa		13.81	□□□□□ -0.2
UBE2F-223	ENST00000612130	QTRT2	Q9H974	415 aa	Known RBP	13.81	□□□□□ -0.2
UBE2F-223	ENST00000612130	CYP4F12	Q9HCS2	524 aa		13.81	□□□□□ -0.2
UBE2F-223	ENST00000612130	WDR6	Q9NNW5	1121 aa	Known RBP	13.81	□□□□□ -0.2
UBE2F-223	ENST00000612130	SMPD3	Q9NY59	655 aa	Predicted RBP	13.81	□□□□□ -0.2
UBE2F-223	ENST00000612130	UBP1	Q9NZI7	540 aa		13.81	□□□□□ -0.2
UBE2F-223	ENST00000612130	PKD2L2	Q9NZM6	624 aa		13.81	□□□□□ -0.2
UBE2F-223	ENST00000612130	OAZ3	Q9UMX2	235 aa		13.81	□□□□□ -0.2
UBE2F-223	ENST00000612130	TCAF1	Q9Y4C2	921 aa		13.81	□□□□□ -0.2
UBE2F-223	ENST00000612130	TRAF6	Q9Y4K3	522 aa		13.81	□□□□□ -0.2
UBE2F-223	ENST00000612130	COL1A2	P08123	1366 aa		13.8	□□□□□ -0.2
UBE2F-223	ENST00000612130		K7EPI3	171 aa		13.8	□□□□□ -0.2
UBE2F-223	ENST00000612130	ACOX3	O15254	700 aa		13.8	□□□□□ -0.2
UBE2F-223	ENST00000612130	SEC24D	O94855	1032 aa	Predicted RBP	13.8	□□□□□ -0.2
UBE2F-223	ENST00000612130	PSMD7	P51665	324 aa		13.8	□□□□□ -0.2
UBE2F-223	ENST00000612130	PITRM1	Q5JRX3	1037 aa		13.8	□□□□□ -0.2
UBE2F-223	ENST00000612130	BTBD8	Q5XKL5	378 aa		13.8	□□□□□ -0.2
UBE2F-223	ENST00000612130	KIAA0930	Q6ICG6	404 aa	Predicted RBP	13.8	□□□□□ -0.2
UBE2F-223	ENST00000612130	NANOGP8	Q6NSW7	305 aa		13.8	□□□□□ -0.2
UBE2F-223	ENST00000612130	XKR5	Q6UX68	686 aa		13.8	□□□□□ -0.2
UBE2F-223	ENST00000612130	CMTR2	Q8IYT2	770 aa	Known RBP	13.8	□□□□□ -0.2
UBE2F-223	ENST00000612130	TRPV3	Q8NET8	790 aa		13.8	□□□□□ -0.2
UBE2F-223	ENST00000612130	C18orf25	Q96B23	403 aa	Predicted RBP	13.8	□□□□□ -0.2
UBE2F-223	ENST00000612130	KLRG1	Q96E93	195 aa		13.8	□□□□□ -0.2
UBE2F-223	ENST00000612130	C19orf60	Q96EN9	201 aa		13.8	□□□□□ -0.2
UBE2F-223	ENST00000612130	FBXL20	Q96IG2	436 aa		13.8	□□□□□ -0.2
UBE2F-223	ENST00000612130	ZNF560	Q96MR9	790 aa		13.8	□□□□□ -0.2
UBE2F-223	ENST00000612130	CXCL16	Q9H2A7	254 aa		13.8	□□□□□ -0.2
UBE2F-223	ENST00000612130	GSTO2	Q9H4Y5	243 aa		13.8	□□□□□ -0.2
UBE2F-223	ENST00000612130	GDAP2	Q9NXN4	497 aa		13.8	□□□□□ -0.2
UBE2F-223	ENST00000612130	SELENON	Q9NZV5	590 aa		13.8	□□□□□ -0.2
UBE2F-223	ENST00000612130	GMPR2	Q9P2T1	348 aa	Known RBP	13.8	□□□□□ -0.2
UBE2F-223	ENST00000612130	SFMBT1	Q9UHJ3	866 aa		13.8	□□□□□ -0.2
UBE2F-223	ENST00000612130	PEX10	O60683	326 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	SULT1C4	O75897	302 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	JCHAIN	P01591	159 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	FUCA1	P04066	466 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	LTA4H	P09960	611 aa	Known RBP	13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	NPR3	P17342	541 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	CD247	P20963	164 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	KCNA5	P22460	613 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	GJA9	P57773	515 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	NFATC3	Q12968	1075 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	CSHL1	Q14406	222 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	ARL13B	Q3SXY8	428 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	COQ5	Q5HYK3	327 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	CCNYL2	Q5T2Q4	361 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	ZNF470	Q6ECI4	717 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	CYHR1	Q6ZMK1	362 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	USP51	Q70EK9	711 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	SPPL2C	Q8IUH8	684 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	CPNE9	Q8IYJ1	553 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	RNF169	Q8NCN4	708 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	OR13F1	Q8NGS4	319 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	TANK	Q92844	425 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	COPS5	Q92905	334 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	ACD	Q96AP0	544 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	C1orf50	Q9BV19	199 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	GID8	Q9NWU2	228 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	SNTG2	Q9NY99	539 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	FBXW11	Q9UKB1	542 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	UBQLN1	Q9UMX0	589 aa	Known RBP	13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	SBF1	O95248	1867 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130		A0A0J9YYE9	177 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	FAM149A	A5PLN7	773 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	NR5A2	O00482	541 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	EI24	O14681	340 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	ARPC2	O15144	300 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	FOXD2	O60548	495 aa	Predicted RBP	13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	ANXA9	O76027	345 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	ALDH2	P05091	517 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	GFAP	P14136	432 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	JUNB	P17275	347 aa	Predicted RBP	13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	CCNA2	P20248	432 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	YWHAQ	P27348	245 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	RFC2	P35250	354 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	PNPLA4	P41247	253 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	CLCN5	P51795	746 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	BMX	P51813	675 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	OXCT1	P55809	520 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	BNIP3	Q12983	259 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	LAMC2	Q13753	1193 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	POU6F1	Q14863	301 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	ESRP1	Q6NXG1	681 aa	Known RBP	13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	LIMS2	Q7Z4I7	341 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	FBXO16	Q8IX29	292 aa	Predicted RBP	13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	MICALL2	Q8IY33	904 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	SLC15A3	Q8IY34	581 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	SNX31	Q8N9S9	440 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	LEMD2	Q8NC56	503 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	HDAC10	Q969S8	669 aa		13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	PGAP3	Q96FM1	320 aa	Predicted RBP	13.79	□□□□□ -0.2
UBE2F-223	ENST00000612130	TSPAN17	Q96FV3	270 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 173.5 ms