RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 UBP1Q9NZI7 540 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 B4GALT6Q9UBX8 382 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 FAM153AQ9UHL3 310 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 SNX12Q9UMY4 172 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 ZKSCAN5Q9Y2L8 839 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 PPIL1Q9Y3C6 166 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 ANKRD36A6QL64 1941 aa14.43□□□□□ -0.1
LIG1-208ENST00000595758 RALGAPA1Q6GYQ0 2036 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 TRPM6Q9BX84 2022 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 A8MX80 341 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 F5H423 210 aaPredicted RBP14.42□□□□□ -0.1
LIG1-208ENST00000595758 WNT9AO14904 365 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 OPHN1O60890 802 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 TM7SF2O76062 418 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 CYP2A6P11509 494 aaPredicted RBP14.42□□□□□ -0.1
LIG1-208ENST00000595758 CTPS1P17812 591 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 HNRNPA2B1P22626 353 aaKnown RBP14.42□□□□□ -0.1
LIG1-208ENST00000595758 AKT2P31751 481 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 STIP1P31948 543 aaKnown RBP14.42□□□□□ -0.1
LIG1-208ENST00000595758 VIPR1P32241 457 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 CSNK1EP49674 416 aaKnown RBP14.42□□□□□ -0.1
LIG1-208ENST00000595758 CDK18Q07002 472 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 RALGDSQ12967 914 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 SNX1Q13596 522 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 FGL2Q14314 439 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 STAT4Q14765 748 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 OASLQ15646 514 aaKnown RBP14.42□□□□□ -0.1
LIG1-208ENST00000595758 PCSK7Q16549 785 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 CCDC70Q6NSX1 233 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 PRR23CQ6ZRP0 262 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 KDELC2Q7Z4H8 507 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 RASGEF1CQ8N431 466 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 COG1Q8WTW3 980 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 IFT43Q96FT9 208 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 OXNAD1Q96HP4 312 aaPredicted RBP14.42□□□□□ -0.1
LIG1-208ENST00000595758 MS4A14Q96JA4 679 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 MCCC1Q96RQ3 725 aaPredicted RBP14.42□□□□□ -0.1
LIG1-208ENST00000595758 C1QTNF7Q9BXJ2 289 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 GBA3Q9H227 469 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 CAPN10Q9HC96 672 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 HOMER3Q9NSC5 361 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 ZNF148Q9UQR1 794 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 FRYLO94915 3013 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 PI4KAP42356 2102 aa14.42□□□□□ -0.1
LIG1-208ENST00000595758 A0A0J9YYE9 177 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 A0A1B0GVT2 93 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 LZTS3O60299 673 aaPredicted RBP14.41□□□□□ -0.1
LIG1-208ENST00000595758 GCATO75600 419 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 ANXA9O76027 345 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 TRBC1P01850 177 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 ALPIP09923 528 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 ELFN1P0C7U0 828 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 C6P13671 934 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 CD38P28907 300 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 HNF1BP35680 557 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 GRIA4P48058 902 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 WNT3AP56704 352 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 PRPSAP1Q14558 356 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 PTPRRQ15256 657 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 QPCTQ16769 361 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 KDELC1Q6UW63 502 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 LIPIQ6XZB0 460 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 ARHGEF18Q6ZSZ5 1173 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 KIAA2013Q8IYS2 634 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 MFSD2AQ8NA29 543 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 SKA1Q96BD8 255 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 RMDN1Q96DB5 314 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 LENG8Q96PV6 779 aaPredicted RBP14.41□□□□□ -0.1
LIG1-208ENST00000595758 SMIM14Q96QK8 99 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 TRIB3Q96RU7 358 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 NAP1L3Q99457 506 aaPredicted RBP14.41□□□□□ -0.1
LIG1-208ENST00000595758 NAPGQ99747 312 aaPredicted RBP14.41□□□□□ -0.1
LIG1-208ENST00000595758 MYOCQ99972 504 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 FZD3Q9NPG1 666 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 FSCN3Q9NQT6 498 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 TTC7AQ9ULT0 858 aaPredicted RBP14.41□□□□□ -0.1
LIG1-208ENST00000595758 CA5BQ9Y2D0 317 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.41□□□□□ -0.1
LIG1-208ENST00000595758 KNL1Q8NG31 2342 aa14.41□□□□□ -0.1
LIG1-208ENST00000595758 A0A1W2PR77 199 aa14.4□□□□□ -0.1
LIG1-208ENST00000595758 CTAGE9A4FU28 777 aa14.4□□□□□ -0.1
LIG1-208ENST00000595758 NPIPB15A6NHN6 443 aaPredicted RBP14.4□□□□□ -0.1
LIG1-208ENST00000595758 ANKRD66B4E2M5 251 aa14.4□□□□□ -0.1
LIG1-208ENST00000595758 PGRMC1O00264 195 aaKnown RBP14.4□□□□□ -0.1
LIG1-208ENST00000595758 CES2O00748 559 aa14.4□□□□□ -0.1
LIG1-208ENST00000595758 ARHGAP33O14559 1287 aa14.4□□□□□ -0.1
LIG1-208ENST00000595758 VILLO15195 856 aa14.4□□□□□ -0.1
LIG1-208ENST00000595758 RAD51BO15315 384 aa14.4□□□□□ -0.1
LIG1-208ENST00000595758 HEXIM1O94992 359 aaKnown RBP14.4□□□□□ -0.1
LIG1-208ENST00000595758 NDST3O95803 873 aa14.4□□□□□ -0.1
LIG1-208ENST00000595758 EPOP01588 193 aa14.4□□□□□ -0.1
LIG1-208ENST00000595758 ITGAVP06756 1048 aa14.4□□□□□ -0.1
LIG1-208ENST00000595758 SYPP08247 313 aa14.4□□□□□ -0.1
LIG1-208ENST00000595758 TCP1P17987 556 aaKnown RBP14.4□□□□□ -0.1
LIG1-208ENST00000595758 PSMB4P28070 264 aa14.4□□□□□ -0.1
LIG1-208ENST00000595758 TNNT3P45378 269 aaPredicted RBP14.4□□□□□ -0.1
LIG1-208ENST00000595758 GEMP55040 296 aa14.4□□□□□ -0.1
LIG1-208ENST00000595758 GDF10P55107 478 aa14.4□□□□□ -0.1
LIG1-208ENST00000595758 C21orf59P57076 290 aa14.4□□□□□ -0.1
LIG1-208ENST00000595758 MPP3Q13368 585 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms