RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 AP3B1O00203 1094 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 MATN2O00339 956 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 GLRA3O75311 464 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 PEX11BO96011 259 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 KITP10721 976 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 RAG1P15918 1043 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 ALOX15P16050 662 aaPredicted RBP17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 KCNA4P22459 653 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 ALDH1A3P47895 512 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 NDST2P52849 883 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 LIMK2P53671 638 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 ARHGAP8P85298 464 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 TLE2Q04725 743 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 DLG2Q15700 870 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 TRIM60Q495X7 471 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 FASTKD1Q53R41 847 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 KIAA1841Q6NSI8 718 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 TMCO2Q7Z6W1 182 aaPredicted RBP17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 CATSPER1Q8NEC5 780 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 PPP1R14CQ8TAE6 165 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 RAB3IL1Q8TBN0 382 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 ACTRT2Q8TDY3 377 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 MRGPRX2Q96LB1 330 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 KIFC1Q9BW19 673 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 NACA2Q9H009 215 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 SP110Q9HB58 689 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 PCDH10Q9P2E7 1040 aa17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 HBS1LQ9Y450 684 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-205ENST00000594973 SERPINB7O75635 380 aa17.17■□□□□ 0.34
SHKBP1-205ENST00000594973 SAT1P21673 171 aa17.17■□□□□ 0.34
SHKBP1-205ENST00000594973 SMARCB1Q12824 385 aa17.17■□□□□ 0.34
SHKBP1-205ENST00000594973 PCID2Q5JVF3 399 aa17.17■□□□□ 0.34
SHKBP1-205ENST00000594973 FAM117BQ6P1L5 589 aa17.17■□□□□ 0.34
SHKBP1-205ENST00000594973 LRRC49Q8IUZ0 686 aa17.17■□□□□ 0.34
SHKBP1-205ENST00000594973 CFAP52Q8N1V2 620 aa17.17■□□□□ 0.34
SHKBP1-205ENST00000594973 ACVR1CQ8NER5 493 aa17.17■□□□□ 0.34
SHKBP1-205ENST00000594973 TRPC4APQ8TEL6 797 aa17.17■□□□□ 0.34
SHKBP1-205ENST00000594973 ITPKCQ96DU7 683 aa17.17■□□□□ 0.34
SHKBP1-205ENST00000594973 DCUN1D1Q96GG9 259 aa17.17■□□□□ 0.34
SHKBP1-205ENST00000594973 ZNF512Q96ME7 567 aaPredicted RBP17.17■□□□□ 0.34
SHKBP1-205ENST00000594973 VN1R3Q9BXE9 311 aa17.17■□□□□ 0.34
SHKBP1-205ENST00000594973 RSL24D1Q9UHA3 163 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-205ENST00000594973 DCDC2Q9UHG0 476 aa17.17■□□□□ 0.34
SHKBP1-205ENST00000594973 OGDHLQ9ULD0 1010 aa17.17■□□□□ 0.34
SHKBP1-205ENST00000594973 IGLV3-10A0A075B6K4 115 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 HTR3EA5X5Y0 456 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 VAPBO95292 243 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 CXCL10P02778 98 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 FUT4P22083 530 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 OR1E1P30953 314 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 ADRA1AP35348 466 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 ETFBP38117 255 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 CDK9P50750 372 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 RENBPP51606 427 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 SEPT6Q14141 434 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 MARC1Q5VT66 337 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 NADSYN1Q6IA69 706 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 PKN3Q6P5Z2 889 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 SLC39A5Q6ZMH5 540 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 KBTBD6Q86V97 674 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 KLHDC8BQ8IXV7 354 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 C20orf27Q9GZN8 174 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 TMEM216Q9P0N5 145 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 SLC2A6Q9UGQ3 507 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 CAPN8A6NHC0 703 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 H3BNX3 289 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 PLIN3O60664 434 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 KLHL2O95198 593 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 GSRP00390 522 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 CD86P42081 329 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 HSPA13P48723 471 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 PGGT1BP53609 377 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 WNT3AP56704 352 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 MYBPC1Q00872 1141 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 POLD3Q15054 466 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 SPOUT1Q5T280 376 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 ESRP1Q6NXG1 681 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 ARID3BQ8IVW6 561 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 PPHLN1Q8NEY8 458 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 ENTPD7Q9NQZ7 604 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 SUN2Q9UH99 717 aa17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 TDRKHQ9Y2W6 561 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-205ENST00000594973 RAMP2O60895 175 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 IGLV3-27P01718 113 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 FAM58BPP0C7Q3 252 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 ALDH18A1P54886 795 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 IRF9Q00978 393 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 RELAQ04206 551 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 FRG1Q14331 258 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 CNGA3Q16281 694 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 RABGAP1LQ5R372 815 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 PDPK2PQ6A1A2 396 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 SLC8B1Q6J4K2 584 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 CRLF3Q8IUI8 442 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 TNS4Q8IZW8 715 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 PLD6Q8N2A8 252 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 C2orf15Q8WU43 125 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 VPS39Q96JC1 886 aa17.15■□□□□ 0.34
SHKBP1-205ENST00000594973 HAUS8Q9BT25 410 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms