RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 RECQL5O94762 991 aaPredicted RBP18.57■□□□□ 0.56
SHKBP1-202ENST00000593764 PGLSO95336 258 aa18.57■□□□□ 0.56
SHKBP1-202ENST00000593764 KRT1P04264 644 aa18.57■□□□□ 0.56
SHKBP1-202ENST00000593764 TNNT1P13805 278 aa18.57■□□□□ 0.56
SHKBP1-202ENST00000593764 HNRNPKP61978 463 aaKnown RBP eCLIP18.57■□□□□ 0.56
SHKBP1-202ENST00000593764 ZNF211Q13398 564 aaPredicted RBP18.57■□□□□ 0.56
SHKBP1-202ENST00000593764 TAZQ16635 292 aa18.57■□□□□ 0.56
SHKBP1-202ENST00000593764 MFSD7Q6UXD7 560 aa18.57■□□□□ 0.56
SHKBP1-202ENST00000593764 RAD9BQ6WBX8 426 aa18.57■□□□□ 0.56
SHKBP1-202ENST00000593764 CBARPQ8N350 705 aaPredicted RBP18.57■□□□□ 0.56
SHKBP1-202ENST00000593764 CCNYQ8ND76 341 aa18.57■□□□□ 0.56
SHKBP1-202ENST00000593764 PDCD6IPQ8WUM4 868 aaKnown RBP18.57■□□□□ 0.56
SHKBP1-202ENST00000593764 POLR1EQ9GZS1 481 aaKnown RBP18.57■□□□□ 0.56
SHKBP1-202ENST00000593764 B4GALT6Q9UBX8 382 aa18.57■□□□□ 0.56
SHKBP1-202ENST00000593764 AMACRQ9UHK6 382 aa18.57■□□□□ 0.56
SHKBP1-202ENST00000593764 PHTF1Q9UMS5 762 aa18.57■□□□□ 0.56
SHKBP1-202ENST00000593764 REXO2Q9Y3B8 237 aaKnown RBP18.57■□□□□ 0.56
SHKBP1-202ENST00000593764 PPIL1Q9Y3C6 166 aa18.57■□□□□ 0.56
SHKBP1-202ENST00000593764 HEY1Q9Y5J3 304 aa18.57■□□□□ 0.56
SHKBP1-202ENST00000593764 PTPRBP23467 1997 aa18.56■□□□□ 0.56
SHKBP1-202ENST00000593764 C1QTNF9BB2RNN3 333 aa18.56■□□□□ 0.56
SHKBP1-202ENST00000593764 APOL1O14791 398 aa18.56■□□□□ 0.56
SHKBP1-202ENST00000593764 SCAMP1O15126 338 aa18.56■□□□□ 0.56
SHKBP1-202ENST00000593764 FZD6O60353 706 aa18.56■□□□□ 0.56
SHKBP1-202ENST00000593764 PDHA1P08559 390 aa18.56■□□□□ 0.56
SHKBP1-202ENST00000593764 ELFN1P0C7U0 828 aa18.56■□□□□ 0.56
SHKBP1-202ENST00000593764 C1QTNF9P0C862 333 aa18.56■□□□□ 0.56
SHKBP1-202ENST00000593764 DSC2Q02487 901 aa18.56■□□□□ 0.56
SHKBP1-202ENST00000593764 PPIDQ08752 370 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-202ENST00000593764 INPP5AQ14642 412 aa18.56■□□□□ 0.56
SHKBP1-202ENST00000593764 PTPRRQ15256 657 aa18.56■□□□□ 0.56
SHKBP1-202ENST00000593764 PROX2Q3B8N5 592 aa18.56■□□□□ 0.56
SHKBP1-202ENST00000593764 NPNTQ6UXI9 565 aa18.56■□□□□ 0.56
SHKBP1-202ENST00000593764 CCDC13Q8IYE1 715 aa18.56■□□□□ 0.56
SHKBP1-202ENST00000593764 PAF1Q8N7H5 531 aa18.56■□□□□ 0.56
SHKBP1-202ENST00000593764 PLA2G15Q8NCC3 412 aa18.56■□□□□ 0.56
SHKBP1-202ENST00000593764 OR4C6Q8NH72 309 aa18.56■□□□□ 0.56
SHKBP1-202ENST00000593764 ARRDC2Q8TBH0 407 aa18.56■□□□□ 0.56
SHKBP1-202ENST00000593764 PIH1D2Q8WWB5 315 aa18.56■□□□□ 0.56
SHKBP1-202ENST00000593764 MAK16Q9BXY0 300 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-202ENST00000593764 PCDHGA1Q9Y5H4 931 aa18.56■□□□□ 0.56
SHKBP1-202ENST00000593764 RAI2Q9Y5P3 530 aa18.56■□□□□ 0.56
SHKBP1-202ENST00000593764 DUSP10Q9Y6W6 482 aa18.56■□□□□ 0.56
SHKBP1-202ENST00000593764 PLXNB3Q9ULL4 1909 aa18.56■□□□□ 0.56
SHKBP1-202ENST00000593764 FFAR2O15552 330 aa18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 PSTPIP1O43586 416 aa18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 CPP00450 1065 aa18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 JCHAINP01591 159 aa18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 HLA-DQB2P05538 268 aa18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 JUNDP17535 347 aa18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 CES1P23141 567 aa18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 CDKN2BP42772 138 aa18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 ACADVLP49748 655 aa18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 PEX5P50542 639 aa18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 THOP1P52888 689 aa18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 ITKQ08881 620 aa18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 NIPAL4Q0D2K0 466 aa18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 PTK2BQ14289 1009 aa18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 CNGA3Q16281 694 aa18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 FAM182AQ5T1J6 154 aa18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 ARMC12Q5T9G4 340 aa18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 TMPRSS7Q7RTY8 843 aa18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 RFX6Q8HWS3 928 aa18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 TMEM139Q8IV31 216 aa18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 CNTD1Q8N815 330 aa18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 ZNF548Q8NEK5 533 aaPredicted RBP18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 TPCN2Q8NHX9 752 aa18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 SCRN2Q96FV2 425 aa18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 COQ10AQ96MF6 247 aa18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 OLFM3Q96PB7 478 aa18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 MCCC1Q96RQ3 725 aaPredicted RBP18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 IL12RB2Q99665 862 aa18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 APOOQ9BUR5 198 aa18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 TCEAL2Q9H3H9 227 aaPredicted RBP18.55■□□□□ 0.56
SHKBP1-202ENST00000593764 DMXL2Q8TDJ6 3036 aa18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 IGF2RP11717 2491 aa18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 NPIPB15A6NHN6 443 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 KCNK1O00180 336 aa18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 NEBLO76041 1014 aa18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 HEXIM1O94992 359 aaKnown RBP18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 PRLP01236 227 aa18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 PCCBP05166 539 aa18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 ZFXP17010 805 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 CKMT2P17540 419 aa18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 LHCGRP22888 699 aa18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 VIPR1P32241 457 aa18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 MARCKSL1P49006 195 aa18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 IFI35P80217 286 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 ZBTB17Q13105 803 aa18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 CCDC157Q569K6 752 aa18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 C11orf63Q6NUN7 778 aa18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 DHRS13Q6UX07 377 aa18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 UNQ6494/PRO21346Q6UXR6 183 aa18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 CCNI2Q6ZMN8 369 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 MACC1Q6ZN28 852 aa18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 PELI3Q8N2H9 469 aa18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 ZNF830Q96NB3 372 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-202ENST00000593764 SMIM14Q96QK8 99 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms