RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 GIMD1P0DJR0 217 aa27.35■■□□□ 1.97
SMAD4-213ENST00000591914 TNNT1P13805 278 aa27.35■■□□□ 1.97
SMAD4-213ENST00000591914 PPIDQ08752 370 aaKnown RBP27.35■■□□□ 1.97
SMAD4-213ENST00000591914 EIF2B5Q13144 721 aaKnown RBP27.35■■□□□ 1.97
SMAD4-213ENST00000591914 ZNF211Q13398 564 aaPredicted RBP27.35■■□□□ 1.97
SMAD4-213ENST00000591914 PROX2Q3B8N5 592 aa27.35■■□□□ 1.97
SMAD4-213ENST00000591914 CCDC13Q8IYE1 715 aa27.35■■□□□ 1.97
SMAD4-213ENST00000591914 CCNYQ8ND76 341 aa27.35■■□□□ 1.97
SMAD4-213ENST00000591914 MAK16Q9BXY0 300 aaKnown RBP27.35■■□□□ 1.97
SMAD4-213ENST00000591914 GOLPH3Q9H4A6 298 aa27.35■■□□□ 1.97
SMAD4-213ENST00000591914 HAUS2Q9NVX0 235 aa27.35■■□□□ 1.97
SMAD4-213ENST00000591914 PHTF1Q9UMS5 762 aa27.35■■□□□ 1.97
SMAD4-213ENST00000591914 PCDHGA1Q9Y5H4 931 aa27.35■■□□□ 1.97
SMAD4-213ENST00000591914 HEY1Q9Y5J3 304 aa27.35■■□□□ 1.97
SMAD4-213ENST00000591914 H3BM21 787 aa27.34■■□□□ 1.97
SMAD4-213ENST00000591914 RECQL5O94762 991 aaPredicted RBP27.34■■□□□ 1.97
SMAD4-213ENST00000591914 ZFXP17010 805 aaPredicted RBP27.34■■□□□ 1.97
SMAD4-213ENST00000591914 GM2AP17900 193 aa27.34■■□□□ 1.97
SMAD4-213ENST00000591914 CES1P23141 567 aa27.34■■□□□ 1.97
SMAD4-213ENST00000591914 PEX5P50542 639 aa27.34■■□□□ 1.97
SMAD4-213ENST00000591914 ITKQ08881 620 aa27.34■■□□□ 1.97
SMAD4-213ENST00000591914 DNAJC3Q13217 504 aa27.34■■□□□ 1.97
SMAD4-213ENST00000591914 TAZQ16635 292 aa27.34■■□□□ 1.97
SMAD4-213ENST00000591914 ODF2Q5BJF6 829 aa27.34■■□□□ 1.97
SMAD4-213ENST00000591914 ARMC12Q5T9G4 340 aa27.34■■□□□ 1.97
SMAD4-213ENST00000591914 C11orf63Q6NUN7 778 aa27.34■■□□□ 1.97
SMAD4-213ENST00000591914 MFSD7Q6UXD7 560 aa27.34■■□□□ 1.97
SMAD4-213ENST00000591914 MACC1Q6ZN28 852 aa27.34■■□□□ 1.97
SMAD4-213ENST00000591914 GATA6Q92908 595 aa27.34■■□□□ 1.97
SMAD4-213ENST00000591914 LGMNQ99538 433 aa27.34■■□□□ 1.97
SMAD4-213ENST00000591914 RAI2Q9Y5P3 530 aa27.34■■□□□ 1.97
SMAD4-213ENST00000591914 PTPRBP23467 1997 aa27.34■■□□□ 1.97
SMAD4-213ENST00000591914 A8MX80 341 aa27.33■■□□□ 1.97
SMAD4-213ENST00000591914 SCAMP1O15126 338 aa27.33■■□□□ 1.97
SMAD4-213ENST00000591914 SIGLEC6O43699 453 aa27.33■■□□□ 1.97
SMAD4-213ENST00000591914 FZD6O60353 706 aa27.33■■□□□ 1.97
SMAD4-213ENST00000591914 NFKBIAP25963 317 aa27.33■■□□□ 1.97
SMAD4-213ENST00000591914 CDKN2BP42772 138 aa27.33■■□□□ 1.97
SMAD4-213ENST00000591914 ACADVLP49748 655 aa27.33■■□□□ 1.97
SMAD4-213ENST00000591914 DSC2Q02487 901 aa27.33■■□□□ 1.97
SMAD4-213ENST00000591914 IHHQ14623 411 aa27.33■■□□□ 1.97
SMAD4-213ENST00000591914 INPP5AQ14642 412 aa27.33■■□□□ 1.97
SMAD4-213ENST00000591914 RAD9BQ6WBX8 426 aa27.33■■□□□ 1.97
SMAD4-213ENST00000591914 RFX6Q8HWS3 928 aa27.33■■□□□ 1.97
SMAD4-213ENST00000591914 ZNF548Q8NEK5 533 aaPredicted RBP27.33■■□□□ 1.97
SMAD4-213ENST00000591914 ARRDC2Q8TBH0 407 aa27.33■■□□□ 1.97
SMAD4-213ENST00000591914 OLFM3Q96PB7 478 aa27.33■■□□□ 1.97
SMAD4-213ENST00000591914 MCCC1Q96RQ3 725 aaPredicted RBP27.33■■□□□ 1.97
SMAD4-213ENST00000591914 NLGN3Q9NZ94 848 aa27.33■■□□□ 1.97
SMAD4-213ENST00000591914 SALL4Q9UJQ4 1053 aa27.33■■□□□ 1.97
SMAD4-213ENST00000591914 PNMA8BQ9ULN7 279 aaPredicted RBP27.33■■□□□ 1.97
SMAD4-213ENST00000591914 REXO2Q9Y3B8 237 aaKnown RBP27.33■■□□□ 1.97
SMAD4-213ENST00000591914 PPIL1Q9Y3C6 166 aa27.33■■□□□ 1.97
SMAD4-213ENST00000591914 MAP1BP46821 2468 aaKnown RBP27.32■■□□□ 1.96
SMAD4-213ENST00000591914 EPG5Q9HCE0 2579 aa27.32■■□□□ 1.96
SMAD4-213ENST00000591914 RCCD1A6NED2 376 aa27.32■■□□□ 1.96
SMAD4-213ENST00000591914 NEMP2A6NFY4 417 aa27.32■■□□□ 1.96
SMAD4-213ENST00000591914 FFAR2O15552 330 aa27.32■■□□□ 1.96
SMAD4-213ENST00000591914 HLA-DQB2P05538 268 aa27.32■■□□□ 1.96
SMAD4-213ENST00000591914 C1SP09871 688 aa27.32■■□□□ 1.96
SMAD4-213ENST00000591914 JUNDP17535 347 aa27.32■■□□□ 1.96
SMAD4-213ENST00000591914 CKMT2P17540 419 aa27.32■■□□□ 1.96
SMAD4-213ENST00000591914 CDC25BP30305 580 aa27.32■■□□□ 1.96
SMAD4-213ENST00000591914 VIPR1P32241 457 aa27.32■■□□□ 1.96
SMAD4-213ENST00000591914 IFI35P80217 286 aaPredicted RBP27.32■■□□□ 1.96
SMAD4-213ENST00000591914 MTM1Q13496 603 aa27.32■■□□□ 1.96
SMAD4-213ENST00000591914 UNQ6494/PRO21346Q6UXR6 183 aa27.32■■□□□ 1.96
SMAD4-213ENST00000591914 TMPRSS7Q7RTY8 843 aa27.32■■□□□ 1.96
SMAD4-213ENST00000591914 TPCN2Q8NHX9 752 aa27.32■■□□□ 1.96
SMAD4-213ENST00000591914 BTN2A2Q8WVV5 523 aa27.32■■□□□ 1.96
SMAD4-213ENST00000591914 PIH1D2Q8WWB5 315 aa27.32■■□□□ 1.96
SMAD4-213ENST00000591914 SCRN2Q96FV2 425 aa27.32■■□□□ 1.96
SMAD4-213ENST00000591914 COQ10AQ96MF6 247 aa27.32■■□□□ 1.96
SMAD4-213ENST00000591914 IL12RB2Q99665 862 aa27.32■■□□□ 1.96
SMAD4-213ENST00000591914 CSNK1G3Q9Y6M4 447 aa27.32■■□□□ 1.96
SMAD4-213ENST00000591914 WDFY3Q8IZQ1 3526 aa27.31■■□□□ 1.96
SMAD4-213ENST00000591914 C1QTNF9BB2RNN3 333 aa27.31■■□□□ 1.96
SMAD4-213ENST00000591914 KCNK1O00180 336 aa27.31■■□□□ 1.96
SMAD4-213ENST00000591914 HEXIM1O94992 359 aaKnown RBP27.31■■□□□ 1.96
SMAD4-213ENST00000591914 IPO7O95373 1038 aaKnown RBP27.31■■□□□ 1.96
SMAD4-213ENST00000591914 PCCBP05166 539 aa27.31■■□□□ 1.96
SMAD4-213ENST00000591914 PDHA1P08559 390 aa27.31■■□□□ 1.96
SMAD4-213ENST00000591914 C1QTNF9P0C862 333 aa27.31■■□□□ 1.96
SMAD4-213ENST00000591914 PDK1Q15118 436 aa27.31■■□□□ 1.96
SMAD4-213ENST00000591914 CNGA3Q16281 694 aa27.31■■□□□ 1.96
SMAD4-213ENST00000591914 CCDC157Q569K6 752 aa27.31■■□□□ 1.96
SMAD4-213ENST00000591914 NPNTQ6UXI9 565 aa27.31■■□□□ 1.96
SMAD4-213ENST00000591914 KATNAL2Q8IYT4 538 aa27.31■■□□□ 1.96
SMAD4-213ENST00000591914 CBARPQ8N350 705 aaPredicted RBP27.31■■□□□ 1.96
SMAD4-213ENST00000591914 PLA2G15Q8NCC3 412 aa27.31■■□□□ 1.96
SMAD4-213ENST00000591914 TBATAQ96M53 351 aa27.31■■□□□ 1.96
SMAD4-213ENST00000591914 APOOQ9BUR5 198 aa27.31■■□□□ 1.96
SMAD4-213ENST00000591914 IMPACTQ9P2X3 320 aa27.31■■□□□ 1.96
SMAD4-213ENST00000591914 TTLL3Q9Y4R7 772 aa27.31■■□□□ 1.96
SMAD4-213ENST00000591914 NPIPB15A6NHN6 443 aaPredicted RBP27.3■■□□□ 1.96
SMAD4-213ENST00000591914 RFPL3O75679 317 aa27.3■■□□□ 1.96
SMAD4-213ENST00000591914 NEBLO76041 1014 aa27.3■■□□□ 1.96
SMAD4-213ENST00000591914 JCHAINP01591 159 aa27.3■■□□□ 1.96
SMAD4-213ENST00000591914 ALPPL2P10696 532 aa27.3■■□□□ 1.96
SMAD4-213ENST00000591914 CDK4P11802 303 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms