RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 TMEFF1Q8IYR6 380 aa9.11□□□□□ -0.95
CIRBP-218ENST00000588344 SPATA4Q8NEY3 305 aa9.11□□□□□ -0.95
CIRBP-218ENST00000588344 MRGPRX2Q96LB1 330 aa9.11□□□□□ -0.95
CIRBP-218ENST00000588344 NSMCE3Q96MG7 304 aa9.11□□□□□ -0.95
CIRBP-218ENST00000588344 TRIB3Q96RU7 358 aa9.11□□□□□ -0.95
CIRBP-218ENST00000588344 C19orf43Q9BQ61 176 aa9.11□□□□□ -0.95
CIRBP-218ENST00000588344 SLC17A9Q9BYT1 436 aa9.11□□□□□ -0.95
CIRBP-218ENST00000588344 CDH19Q9H159 772 aa9.11□□□□□ -0.95
CIRBP-218ENST00000588344 ARNT2Q9HBZ2 717 aa9.11□□□□□ -0.95
CIRBP-218ENST00000588344 RAB6BQ9NRW1 208 aa9.11□□□□□ -0.95
CIRBP-218ENST00000588344 RAD18Q9NS91 495 aa9.11□□□□□ -0.95
CIRBP-218ENST00000588344 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.11□□□□□ -0.95
CIRBP-218ENST00000588344 MIA3Q5JRA6 1907 aa9.11□□□□□ -0.95
CIRBP-218ENST00000588344 CHD5Q8TDI0 1954 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 MUC22E2RYF6 1773 aaPredicted RBP9.1□□□□□ -0.95
CIRBP-218ENST00000588344 A0A1W2PPC4 97 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 CAPN8A6NHC0 703 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 MEI4A8MW99 385 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 SMAPO00193 183 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 PLK4O00444 970 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 TOR1BO14657 336 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 FANCGO15287 622 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 ZNF500O60304 480 aaPredicted RBP9.1□□□□□ -0.95
CIRBP-218ENST00000588344 LRP3O75074 770 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 SUN1O94901 812 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 AP2A1O95782 977 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 KRT14P02533 472 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 RETP07949 1114 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 ELFN1P0C7U0 828 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 BCKDHBP21953 392 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 HNRNPA2B1P22626 353 aaKnown RBP9.1□□□□□ -0.95
CIRBP-218ENST00000588344 PSMB4P28070 264 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 AKT2P31751 481 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 RPL22P35268 128 aaKnown RBP9.1□□□□□ -0.95
CIRBP-218ENST00000588344 ADRA1AP35348 466 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 HNF1BP35680 557 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 LIG3P49916 1009 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 OVGP1Q12889 678 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 SRSF5Q13243 272 aaKnown RBP9.1□□□□□ -0.95
CIRBP-218ENST00000588344 SEMA5AQ13591 1074 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 IHHQ14623 411 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 STAT4Q14765 748 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 PPP1R7Q15435 360 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 SLC1A5Q15758 541 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 PCSK7Q16549 785 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 QPCTQ16769 361 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 ZNF284Q2VY69 593 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 TMEM259Q4ZIN3 620 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 ARMC3Q5W041 872 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 KCTD11Q693B1 232 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 TTC27Q6P3X3 843 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 LIPIQ6XZB0 460 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 ZNF572Q7Z3I7 529 aaPredicted RBP9.1□□□□□ -0.95
CIRBP-218ENST00000588344 IQCHQ86VS3 1027 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 NLRP8Q86W28 1048 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 ZSWIM9Q86XI8 627 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 DCP2Q8IU60 420 aaKnown RBP9.1□□□□□ -0.95
CIRBP-218ENST00000588344 SYT12Q8IV01 421 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 NRSN1Q8IZ57 195 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 RGL4Q8IZJ4 473 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 CBARPQ8N350 705 aaPredicted RBP9.1□□□□□ -0.95
CIRBP-218ENST00000588344 GPR161Q8N6U8 529 aaKnown RBP9.1□□□□□ -0.95
CIRBP-218ENST00000588344 FRMD1Q8N878 549 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 DENND6BQ8NEG7 585 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 LPCAT1Q8NF37 534 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 IPMKQ8NFU5 416 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 BIRC7Q96CA5 298 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 OXNAD1Q96HP4 312 aaPredicted RBP9.1□□□□□ -0.95
CIRBP-218ENST00000588344 HSPA12BQ96MM6 686 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 C1QTNF2Q9BXJ5 285 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 C6orf106Q9H6K1 298 aaPredicted RBP9.1□□□□□ -0.95
CIRBP-218ENST00000588344 ETNK1Q9HBU6 452 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 EIF2B3Q9NR50 452 aaKnown RBP9.1□□□□□ -0.95
CIRBP-218ENST00000588344 UBP1Q9NZI7 540 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.1□□□□□ -0.95
CIRBP-218ENST00000588344 B4GALT6Q9UBX8 382 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 GMEB2Q9UKD1 530 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 HS3ST3A1Q9Y663 406 aa9.1□□□□□ -0.95
CIRBP-218ENST00000588344 A0A1B0GTW7 788 aa9.09□□□□□ -0.95
CIRBP-218ENST00000588344 FAM187AA6NFU0 413 aa9.09□□□□□ -0.95
CIRBP-218ENST00000588344 IGLON5A6NGN9 336 aa9.09□□□□□ -0.95
CIRBP-218ENST00000588344 C2orf81A6NN90 581 aa9.09□□□□□ -0.95
CIRBP-218ENST00000588344 PDE2AO00408 941 aaPredicted RBP9.09□□□□□ -0.95
CIRBP-218ENST00000588344 WNT9AO14904 365 aa9.09□□□□□ -0.95
CIRBP-218ENST00000588344 LZTS3O60299 673 aaPredicted RBP9.09□□□□□ -0.95
CIRBP-218ENST00000588344 PPFIA2O75334 1257 aa9.09□□□□□ -0.95
CIRBP-218ENST00000588344 HEXIM1O94992 359 aaKnown RBP9.09□□□□□ -0.95
CIRBP-218ENST00000588344 PAK4O96013 591 aaPredicted RBP9.09□□□□□ -0.95
CIRBP-218ENST00000588344 IGHV4-34P06331 123 aa9.09□□□□□ -0.95
CIRBP-218ENST00000588344 PYGLP06737 847 aa9.09□□□□□ -0.95
CIRBP-218ENST00000588344 APRTP07741 180 aa9.09□□□□□ -0.95
CIRBP-218ENST00000588344 ZSCAN5DPP0CG00 497 aa9.09□□□□□ -0.95
CIRBP-218ENST00000588344 ADCY8P40145 1251 aa9.09□□□□□ -0.95
CIRBP-218ENST00000588344 DHPSP49366 369 aaPredicted RBP9.09□□□□□ -0.95
CIRBP-218ENST00000588344 AFF3P51826 1226 aaKnown RBP9.09□□□□□ -0.95
CIRBP-218ENST00000588344 RACK1P63244 317 aaKnown RBP9.09□□□□□ -0.95
CIRBP-218ENST00000588344 DR1Q01658 176 aa9.09□□□□□ -0.95
CIRBP-218ENST00000588344 GPS1Q13098 491 aa9.09□□□□□ -0.95
CIRBP-218ENST00000588344 TEAD4Q15561 434 aa9.09□□□□□ -0.95
CIRBP-218ENST00000588344 SIRPB2Q5JXA9 342 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms