RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 ATL2Q8NHH9 583 aa16.26■□□□□ 0.19
SREBF1-221ENST00000583080 CCL4L1Q8NHW4 92 aa16.26■□□□□ 0.19
SREBF1-221ENST00000583080 FUCA2Q9BTY2 467 aa16.26■□□□□ 0.19
SREBF1-221ENST00000583080 STK33Q9BYT3 514 aa16.26■□□□□ 0.19
SREBF1-221ENST00000583080 TMEM168Q9H0V1 697 aa16.26■□□□□ 0.19
SREBF1-221ENST00000583080 SEMA6CQ9H3T2 930 aa16.26■□□□□ 0.19
SREBF1-221ENST00000583080 SUV39H2Q9H5I1 410 aa16.26■□□□□ 0.19
SREBF1-221ENST00000583080 SEPT10Q9P0V9 454 aa16.26■□□□□ 0.19
SREBF1-221ENST00000583080 ATP8A1Q9Y2Q0 1164 aa16.26■□□□□ 0.19
SREBF1-221ENST00000583080 RFC1P35251 1148 aaPredicted RBP16.25■□□□□ 0.19
SREBF1-221ENST00000583080 RGRP47804 291 aa16.25■□□□□ 0.19
SREBF1-221ENST00000583080 KIAA1024LP59773 190 aa16.25■□□□□ 0.19
SREBF1-221ENST00000583080 CDR2Q01850 454 aa16.25■□□□□ 0.19
SREBF1-221ENST00000583080 SRSF1Q07955 248 aaKnown RBP eCLIP16.25■□□□□ 0.191e-8■□□□□ 9.9
SREBF1-221ENST00000583080 CLCA4Q14CN2 919 aa16.25■□□□□ 0.19
SREBF1-221ENST00000583080 AGERQ15109 404 aa16.25■□□□□ 0.19
SREBF1-221ENST00000583080 PHF19Q5T6S3 580 aa16.25■□□□□ 0.19
SREBF1-221ENST00000583080 ERAP2Q6P179 960 aa16.25■□□□□ 0.19
SREBF1-221ENST00000583080 OGFOD3Q6PK18 319 aa16.25■□□□□ 0.19
SREBF1-221ENST00000583080 XKR5Q6UX68 686 aa16.25■□□□□ 0.19
SREBF1-221ENST00000583080 SLFN11Q7Z7L1 901 aa16.25■□□□□ 0.19
SREBF1-221ENST00000583080 DNAAF5Q86Y56 855 aa16.25■□□□□ 0.19
SREBF1-221ENST00000583080 CAMK1DQ8IU85 385 aa16.25■□□□□ 0.19
SREBF1-221ENST00000583080 MLKLQ8NB16 471 aa16.25■□□□□ 0.19
SREBF1-221ENST00000583080 JPH3Q8WXH2 748 aaPredicted RBP16.25■□□□□ 0.19
SREBF1-221ENST00000583080 PMEPA1Q969W9 287 aa16.25■□□□□ 0.19
SREBF1-221ENST00000583080 GANQ9H2C0 597 aa16.25■□□□□ 0.19
SREBF1-221ENST00000583080 PDFQ9HBH1 243 aa16.25■□□□□ 0.19
SREBF1-221ENST00000583080 RDH14Q9HBH5 336 aa16.25■□□□□ 0.19
SREBF1-221ENST00000583080 LRIT1Q9P2V4 623 aa16.25■□□□□ 0.19
SREBF1-221ENST00000583080 UBA2Q9UBT2 640 aaPredicted RBP16.25■□□□□ 0.19
SREBF1-221ENST00000583080 SDK2Q58EX2 2172 aa16.25■□□□□ 0.19
SREBF1-221ENST00000583080 DOPEY2Q9Y3R5 2298 aa16.25■□□□□ 0.19
SREBF1-221ENST00000583080 CCP110O43303 1012 aa16.24■□□□□ 0.19
SREBF1-221ENST00000583080 CREB3O43889 395 aa16.24■□□□□ 0.19
SREBF1-221ENST00000583080 GM2AP17900 193 aa16.24■□□□□ 0.19
SREBF1-221ENST00000583080 GPD1P21695 349 aa16.24■□□□□ 0.19
SREBF1-221ENST00000583080 KLK7P49862 253 aa16.24■□□□□ 0.19
SREBF1-221ENST00000583080 YBEYP58557 167 aaPredicted RBP16.24■□□□□ 0.19
SREBF1-221ENST00000583080 DPCR1Q3MIW9 517 aa16.24■□□□□ 0.19
SREBF1-221ENST00000583080 PARP15Q460N3 678 aa16.24■□□□□ 0.19
SREBF1-221ENST00000583080 MAP9Q49MG5 647 aa16.24■□□□□ 0.19
SREBF1-221ENST00000583080 COLEC12Q5KU26 742 aa16.24■□□□□ 0.19
SREBF1-221ENST00000583080 SPECC1LQ69YQ0 1117 aa16.24■□□□□ 0.19
SREBF1-221ENST00000583080 ZNF677Q86XU0 584 aa16.24■□□□□ 0.19
SREBF1-221ENST00000583080 PELI3Q8N2H9 469 aa16.24■□□□□ 0.19
SREBF1-221ENST00000583080 OR56A4Q8NGH8 313 aa16.24■□□□□ 0.19
SREBF1-221ENST00000583080 HCAR2Q8TDS4 363 aa16.24■□□□□ 0.19
SREBF1-221ENST00000583080 TMEM159Q96B96 161 aa16.24■□□□□ 0.19
SREBF1-221ENST00000583080 PCDHB18PQ96TA0 734 aa16.24■□□□□ 0.19
SREBF1-221ENST00000583080 CMKLR1Q99788 373 aa16.24■□□□□ 0.19
SREBF1-221ENST00000583080 LGR4Q9BXB1 951 aa16.24■□□□□ 0.19
SREBF1-221ENST00000583080 ARHGEF17Q96PE2 2063 aaPredicted RBP16.23■□□□□ 0.19
SREBF1-221ENST00000583080 A0A1W2PQC6 194 aa16.23■□□□□ 0.19
SREBF1-221ENST00000583080 J3KR12 359 aa16.23■□□□□ 0.19
SREBF1-221ENST00000583080 CACNB4O00305 520 aaPredicted RBP16.23■□□□□ 0.19
SREBF1-221ENST00000583080 RECQL5O94762 991 aaPredicted RBP16.23■□□□□ 0.19
SREBF1-221ENST00000583080 KRT3P12035 628 aa16.23■□□□□ 0.19
SREBF1-221ENST00000583080 UNGP13051 313 aaPredicted RBP16.23■□□□□ 0.19
SREBF1-221ENST00000583080 CCL4P13236 92 aa16.23■□□□□ 0.19
SREBF1-221ENST00000583080 PNLIPP16233 465 aa16.23■□□□□ 0.19
SREBF1-221ENST00000583080 MAZP56270 477 aaKnown RBP16.23■□□□□ 0.19
SREBF1-221ENST00000583080 B4GALNT1Q00973 533 aa16.23■□□□□ 0.19
SREBF1-221ENST00000583080 ARHGEF7Q14155 803 aa16.23■□□□□ 0.19
SREBF1-221ENST00000583080 EFHC2Q5JST6 749 aa16.23■□□□□ 0.19
SREBF1-221ENST00000583080 CFAP58Q5T655 872 aa16.23■□□□□ 0.19
SREBF1-221ENST00000583080 BRAT1Q6PJG6 821 aa16.23■□□□□ 0.19
SREBF1-221ENST00000583080 WDR59Q6PJI9 974 aa16.23■□□□□ 0.19
SREBF1-221ENST00000583080 UMODL1-AS1Q8N2C9 162 aa16.23■□□□□ 0.19
SREBF1-221ENST00000583080 CELF6Q96J87 481 aaKnown RBP16.23■□□□□ 0.19
SREBF1-221ENST00000583080 SEMA3CQ99985 751 aa16.23■□□□□ 0.19
SREBF1-221ENST00000583080 DPEP2Q9H4A9 486 aa16.23■□□□□ 0.19
SREBF1-221ENST00000583080 CYP4F12Q9HCS2 524 aa16.23■□□□□ 0.19
SREBF1-221ENST00000583080 COL12A1Q99715 3063 aa16.22■□□□□ 0.19
SREBF1-221ENST00000583080 WASH4PA8MWX3 477 aa16.22■□□□□ 0.19
SREBF1-221ENST00000583080 EPHB6O15197 1021 aa16.22■□□□□ 0.19
SREBF1-221ENST00000583080 B4GAT1O43505 415 aa16.22■□□□□ 0.19
SREBF1-221ENST00000583080 NUDT21O43809 227 aaKnown RBP16.22■□□□□ 0.19
SREBF1-221ENST00000583080 PPFIA2O75334 1257 aa16.22■□□□□ 0.19
SREBF1-221ENST00000583080 ARSDP51689 593 aa16.22■□□□□ 0.19
SREBF1-221ENST00000583080 GSCP56915 257 aaPredicted RBP16.22■□□□□ 0.19
SREBF1-221ENST00000583080 TLE1Q04724 770 aa16.22■□□□□ 0.19
SREBF1-221ENST00000583080 BECN1Q14457 450 aa16.22■□□□□ 0.19
SREBF1-221ENST00000583080 AMZ1Q400G9 498 aa16.22■□□□□ 0.19
SREBF1-221ENST00000583080 SCYL2Q6P3W7 929 aa16.22■□□□□ 0.19
SREBF1-221ENST00000583080 LIPIQ6XZB0 460 aa16.22■□□□□ 0.19
SREBF1-221ENST00000583080 ZSCAN1Q8NBB4 408 aa16.22■□□□□ 0.19
SREBF1-221ENST00000583080 RCBTB1Q8NDN9 531 aa16.22■□□□□ 0.19
SREBF1-221ENST00000583080 ZNF641Q96N77 438 aaPredicted RBP16.22■□□□□ 0.19
SREBF1-221ENST00000583080 NUDT22Q9BRQ3 303 aa16.22■□□□□ 0.19
SREBF1-221ENST00000583080 SELENOOQ9BVL4 669 aa16.22■□□□□ 0.19
SREBF1-221ENST00000583080 LRRC19Q9H756 370 aa16.22■□□□□ 0.19
SREBF1-221ENST00000583080 SUDS3Q9H7L9 328 aaPredicted RBP16.22■□□□□ 0.19
SREBF1-221ENST00000583080 SAMSN1Q9NSI8 373 aaKnown RBP16.22■□□□□ 0.19
SREBF1-221ENST00000583080 TAB2Q9NYJ8 693 aa16.22■□□□□ 0.19
SREBF1-221ENST00000583080 MOSPD1Q9UJG1 213 aa16.22■□□□□ 0.19
SREBF1-221ENST00000583080 FZD10Q9ULW2 581 aa16.22■□□□□ 0.19
SREBF1-221ENST00000583080 PCDHB11Q9Y5F2 797 aa16.22■□□□□ 0.19
SREBF1-221ENST00000583080 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.21■□□□□ 0.19
SREBF1-221ENST00000583080 PRAMEF11O60813 436 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms