RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 RALGDSQ12967 914 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 PPP2R5EQ16537 467 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 INAVAQ3KP66 663 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 CCDC181Q5TID7 509 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 KDM7AQ6ZMT4 941 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 DPPA4Q7L190 304 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 NT5DC3Q86UY8 548 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 GATAD2AQ86YP4 633 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 LRRC57Q8N9N7 239 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 RHBDD1Q8TEB9 315 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 AGAP3Q96P47 875 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 IL12RB2Q99665 862 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 TSGA10Q9BZW7 698 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 BRD8Q9H0E9 1235 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 ERVMER34-1Q9H9K5 563 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 B4GALT6Q9UBX8 382 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 PHTF1Q9UMS5 762 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 ADGRG1Q9Y653 693 aa12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 CNOT1A5YKK6 2376 aaKnown RBP12.67□□□□□ -0.38
SMARCE1-218ENST00000582955 SPAARA0A1B0GVQ0 90 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 GOLGA8CPA6NN73 597 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 NRDCO43847 1150 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 PCDHGA12O60330 932 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 FTCDO95954 541 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 CTPS1P17812 591 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 CA4P22748 312 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 EPHA8P29322 1005 aaPredicted RBP12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 GRK6P43250 576 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 EPHB1P54762 984 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 SIM1P81133 766 aaPredicted RBP12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 NIPAL4Q0D2K0 466 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 LRRC14Q15048 493 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 ACOX1Q15067 660 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 IRF4Q15306 451 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 SHBQ15464 509 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 FAM182AQ5T1J6 154 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 N4BP2L1Q5TBK1 243 aaPredicted RBP12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 DENND2CQ68D51 928 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 ALG1LQ6GMV1 187 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 LIPIQ6XZB0 460 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 BBS12Q6ZW61 710 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 USP45Q70EL2 814 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 ZC3H18Q86VM9 953 aaKnown RBP12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 DCP2Q8IU60 420 aaKnown RBP12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 LRRC8AQ8IWT6 810 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 NDUFAF2Q8N183 169 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 SLC22A18ASQ8N1D0 253 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 UBL4BQ8N7F7 174 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 TP53I13Q8NBR0 393 aaPredicted RBP12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 ARRDC2Q8TBH0 407 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 TFB1MQ8WVM0 346 aaKnown RBP12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 CENPTQ96BT3 561 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 MBNL1Q9NR56 388 aaKnown RBP12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 PCOLCE2Q9UKZ9 415 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 GUCA1BQ9UMX6 200 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 PACSIN2Q9UNF0 486 aaPredicted RBP12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 CHKBQ9Y259 395 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 BTBD3Q9Y2F9 522 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 CAPN6Q9Y6Q1 641 aa12.66□□□□□ -0.38
SMARCE1-218ENST00000582955 SPTBN2O15020 2390 aa12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 CFAP69A5D8W1 941 aa12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 MIF4GDA9UHW6 222 aaKnown RBP12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 KRT86O43790 486 aa12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 SDC3O75056 442 aa12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 RECQL5O94762 991 aaPredicted RBP12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 PCCBP05166 539 aa12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 PTMAP06454 111 aaKnown RBP12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 PDHA1P08559 390 aa12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 ALPIP09923 528 aa12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 CYP2A6P11509 494 aaPredicted RBP12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 VIPR1P32241 457 aa12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 CD86P42081 329 aa12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 RXRGP48443 463 aa12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 PEX5P50542 639 aa12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 THOP1P52888 689 aa12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 PFN3P60673 137 aa12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 FOXK2Q01167 660 aa12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 BNIP3Q12983 259 aa12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 PDE1CQ14123 709 aaPredicted RBP12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 ARHGEF7Q14155 803 aa12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 PRKD1Q15139 912 aaPredicted RBP12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 TRIP6Q15654 476 aaKnown RBP12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 WSCD2Q2TBF2 565 aa12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 ZNF542PQ5EBM4 170 aa12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 DBX2Q6ZNG2 339 aa12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 CNTD1Q8N815 330 aa12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 SPOCK2Q92563 424 aa12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 ALG3Q92685 438 aa12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 TDRD1Q9BXT4 1180 aaKnown RBP12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 OSBPL8Q9BZF1 889 aa12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 DNAJC28Q9NX36 388 aa12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 CACNA1AO00555 2505 aa12.65□□□□□ -0.38
SMARCE1-218ENST00000582955 CABIN1Q9Y6J0 2220 aa12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 NPIPB15A6NHN6 443 aaPredicted RBP12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 H7C0C1 242 aa12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 APOC4-APOC2K7ER74 178 aa12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 FZD6O60353 706 aa12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 CBFA2T3O75081 653 aa12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 HEXIM1O94992 359 aaKnown RBP12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 APOC2P02655 101 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms