RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 HDAC3O15379 428 aa23.75■■□□□ 1.39
NPLOC4-217ENST00000574897 TM7SF2O76062 418 aa23.75■■□□□ 1.39
NPLOC4-217ENST00000574897 RHOCP08134 193 aa23.75■■□□□ 1.39
NPLOC4-217ENST00000574897 MYL4P12829 197 aa23.75■■□□□ 1.39
NPLOC4-217ENST00000574897 RAP1GDS1P52306 607 aa23.75■■□□□ 1.39
NPLOC4-217ENST00000574897 PTPRRQ15256 657 aa23.75■■□□□ 1.39
NPLOC4-217ENST00000574897 RCN1Q15293 331 aa23.75■■□□□ 1.39
NPLOC4-217ENST00000574897 PDCD2Q16342 344 aaPredicted RBP23.75■■□□□ 1.39
NPLOC4-217ENST00000574897 SEL1L3Q68CR1 1132 aa23.75■■□□□ 1.39
NPLOC4-217ENST00000574897 ZNF549Q6P9A3 640 aa23.75■■□□□ 1.39
NPLOC4-217ENST00000574897 DTX3LQ8TDB6 740 aa23.75■■□□□ 1.39
NPLOC4-217ENST00000574897 SLC7A8Q9UHI5 535 aa23.75■■□□□ 1.39
NPLOC4-217ENST00000574897 DNAJB1P25685 340 aa23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 COPAP53621 1224 aa23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 IKBKEQ14164 716 aa23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 TAF12Q16514 161 aa23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 LSM12Q3MHD2 195 aaKnown RBP23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 GPR158Q5T848 1215 aa23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 TMEM198Q66K66 360 aa23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 ALG1LQ6GMV1 187 aa23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 LINGO4Q6UY18 593 aa23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 TRIM67Q6ZTA4 783 aa23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 FRMD7Q6ZUT3 714 aa23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 TTC16Q8NEE8 873 aa23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 ZNF599Q96NL3 588 aa23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 PSKH2Q96QS6 385 aa23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 DCLRE1BQ9H816 532 aa23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 SEPT3Q9UH03 358 aa23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 KDELR3O43731 214 aa23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 SORBS2O94875 1100 aaKnown RBP23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 SOD2P04179 222 aa23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 PDHA1P08559 390 aa23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 LTA4HP09960 611 aaKnown RBP23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 KCNC1P48547 511 aa23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 ACVR1Q04771 509 aa23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 PRKAA1Q13131 559 aa23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 FAM83EQ2M2I3 478 aa23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 DIS3LQ8TF46 1054 aaKnown RBP23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 OVCA2Q8WZ82 227 aa23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 PLD4Q96BZ4 506 aa23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 UBXN10Q96LJ8 280 aa23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 PANX3Q96QZ0 392 aa23.74■■□□□ 1.39
NPLOC4-217ENST00000574897 A0A0U1RQS6 177 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 CD3EAPO15446 510 aaKnown RBP23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 DEFB103AP81534 67 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 KLF10Q13118 480 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 CYTH1Q15438 398 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 DNAL1Q4LDG9 190 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 RNF219Q5W0B1 726 aaPredicted RBP23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 KLHDC10Q6PID8 442 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 ARHGAP24Q8N264 748 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 BRSK1Q8TDC3 778 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 MARK4Q96L34 752 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 ZNF570Q96NI8 536 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 KLF16Q9BXK1 252 aaPredicted RBP23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 C1orf21Q9H246 121 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 TNFRSF12AQ9NP84 129 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 FIS1Q9Y3D6 152 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 A0A088AWK7 358 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 A8MT66 165 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 CLDN11O75508 207 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 NDST3O95803 873 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 ARSAP15289 507 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 SERPINB5P36952 375 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 ALDH1A3P47895 512 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 PRKAA2P54646 552 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 TIAL1Q01085 375 aaKnown RBP eCLIP23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 TWF1Q12792 350 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 ZNF177Q13360 481 aaPredicted RBP23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 NAA25Q14CX7 972 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 TMEM150AQ86TG1 271 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 PHF21BQ96EK2 531 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 MYRFLQ96LU7 910 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 ZBED2Q9BTP6 218 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 PCDHGC4Q9Y5F7 938 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 DOCK6Q96HP0 2047 aa23.73■■□□□ 1.39
NPLOC4-217ENST00000574897 SNAP91O60641 907 aa23.72■■□□□ 1.39
NPLOC4-217ENST00000574897 PSMG1O95456 288 aa23.72■■□□□ 1.39
NPLOC4-217ENST00000574897 GLP2RO95838 553 aa23.72■■□□□ 1.39
NPLOC4-217ENST00000574897 SPATA31D3P0C874 917 aa23.72■■□□□ 1.39
NPLOC4-217ENST00000574897 ATP5F1P24539 256 aaPredicted RBP23.72■■□□□ 1.39
NPLOC4-217ENST00000574897 PTDSS1P48651 473 aaKnown RBP23.72■■□□□ 1.39
NPLOC4-217ENST00000574897 PFKPQ01813 784 aa23.72■■□□□ 1.39
NPLOC4-217ENST00000574897 NSUN2Q08J23 767 aaKnown RBP eCLIP23.72■■□□□ 1.39
NPLOC4-217ENST00000574897 SLC14A2Q15849 920 aa23.72■■□□□ 1.39
NPLOC4-217ENST00000574897 FSCBQ5H9T9 825 aa23.72■■□□□ 1.39
NPLOC4-217ENST00000574897 ADGRF1Q5T601 910 aa23.72■■□□□ 1.39
NPLOC4-217ENST00000574897 CXorf57Q6NSI4 855 aaKnown RBP23.72■■□□□ 1.39
NPLOC4-217ENST00000574897 TLDC1Q6P9B6 456 aa23.72■■□□□ 1.39
NPLOC4-217ENST00000574897 SPATA31D4Q6ZUB0 917 aa23.72■■□□□ 1.39
NPLOC4-217ENST00000574897 EFCAB3Q8N7B9 438 aa23.72■■□□□ 1.39
NPLOC4-217ENST00000574897 KDM1BQ8NB78 822 aa23.72■■□□□ 1.39
NPLOC4-217ENST00000574897 BHMTQ93088 406 aa23.72■■□□□ 1.39
NPLOC4-217ENST00000574897 RMDN1Q96DB5 314 aa23.72■■□□□ 1.39
NPLOC4-217ENST00000574897 ALG9Q9H6U8 611 aa23.72■■□□□ 1.39
NPLOC4-217ENST00000574897 RPP40O75818 363 aaKnown RBP23.72■■□□□ 1.39
NPLOC4-217ENST00000574897 WISP3O95389 354 aaPredicted RBP23.72■■□□□ 1.39
NPLOC4-217ENST00000574897 PRLP01236 227 aa23.72■■□□□ 1.39
NPLOC4-217ENST00000574897 EPOP01588 193 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms