RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 AFF1P51825 1210 aaKnown RBP17.54■□□□□ 0.4
SCARF1-205ENST00000571272 YBX1P67809 324 aaKnown RBP17.54■□□□□ 0.4
SCARF1-205ENST00000571272 PSMD5Q16401 504 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 TWF2Q6IBS0 349 aaKnown RBP17.54■□□□□ 0.4
SCARF1-205ENST00000571272 PPP4R4Q6NUP7 873 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 OR2T34Q8NGX1 318 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 OR2T3Q8NH03 318 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 SH3RF2Q8TEC5 729 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 TFAP2CQ92754 450 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 MRGPRX2Q96LB1 330 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 GSTO2Q9H4Y5 243 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 LTBP3Q9NS15 1303 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 RRN3P2A6NIE6 340 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 FOXD2O60548 495 aaPredicted RBP17.54■□□□□ 0.4
SCARF1-205ENST00000571272 CLIC3O95833 236 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 HSPA8P11142 646 aaKnown RBP17.54■□□□□ 0.4
SCARF1-205ENST00000571272 ADRA1AP35348 466 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 RAB41Q5JT25 222 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 TBCELQ5QJ74 424 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 GPC2Q8N158 579 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 SHCBP1Q8NEM2 672 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 SMOXQ9NWM0 555 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 FAF1Q9UNN5 650 aaPredicted RBP17.54■□□□□ 0.4
SCARF1-205ENST00000571272 SLC8A2Q9UPR5 921 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 KCNH4Q9UQ05 1017 aa17.54■□□□□ 0.4
SCARF1-205ENST00000571272 RBM47A0AV96 593 aaKnown RBP17.53■□□□□ 0.4
SCARF1-205ENST00000571272 PPP6CO00743 305 aa17.53■□□□□ 0.4
SCARF1-205ENST00000571272 DDNO94850 711 aaPredicted RBP17.53■□□□□ 0.4
SCARF1-205ENST00000571272 GEMP55040 296 aa17.53■□□□□ 0.4
SCARF1-205ENST00000571272 STX1BP61266 288 aa17.53■□□□□ 0.4
SCARF1-205ENST00000571272 CAPRIN1Q14444 709 aaKnown RBP17.53■□□□□ 0.4
SCARF1-205ENST00000571272 VPS26BQ4G0F5 336 aa17.53■□□□□ 0.4
SCARF1-205ENST00000571272 GPR158Q5T848 1215 aa17.53■□□□□ 0.4
SCARF1-205ENST00000571272 KIAA0930Q6ICG6 404 aaPredicted RBP17.53■□□□□ 0.4
SCARF1-205ENST00000571272 FAM45BPQ6NSW5 357 aa17.53■□□□□ 0.4
SCARF1-205ENST00000571272 TTC33Q6PID6 262 aaPredicted RBP17.53■□□□□ 0.4
SCARF1-205ENST00000571272 FAM43BQ6ZT52 329 aaPredicted RBP17.53■□□□□ 0.4
SCARF1-205ENST00000571272 LARP4Q71RC2 724 aaKnown RBP eCLIP17.53■□□□□ 0.4
SCARF1-205ENST00000571272 FAM45AQ8TCE6 357 aa17.53■□□□□ 0.4
SCARF1-205ENST00000571272 DQX1Q8TE96 717 aaKnown RBP17.53■□□□□ 0.4
SCARF1-205ENST00000571272 IRGQQ8WZA9 623 aa17.53■□□□□ 0.4
SCARF1-205ENST00000571272 CCDC126Q96EE4 140 aa17.53■□□□□ 0.4
SCARF1-205ENST00000571272 SLC45A3Q96JT2 553 aa17.53■□□□□ 0.4
SCARF1-205ENST00000571272 TCF12Q99081 682 aa17.53■□□□□ 0.4
SCARF1-205ENST00000571272 ENTPD7Q9NQZ7 604 aa17.53■□□□□ 0.4
SCARF1-205ENST00000571272 SQORQ9Y6N5 450 aa17.53■□□□□ 0.4
SCARF1-205ENST00000571272 ANKRD12Q6UB98 2062 aa17.53■□□□□ 0.4
SCARF1-205ENST00000571272 HHLA1C9JL84 531 aa17.53■□□□□ 0.4
SCARF1-205ENST00000571272 NME4O00746 187 aa17.53■□□□□ 0.4
SCARF1-205ENST00000571272 GEN1Q17RS7 908 aa17.53■□□□□ 0.4
SCARF1-205ENST00000571272 DUSP28Q4G0W2 176 aa17.53■□□□□ 0.4
SCARF1-205ENST00000571272 DUS1LQ6P1R4 473 aaKnown RBP17.53■□□□□ 0.4
SCARF1-205ENST00000571272 ERMP1Q7Z2K6 904 aa17.53■□□□□ 0.4
SCARF1-205ENST00000571272 GPR141Q7Z602 305 aa17.53■□□□□ 0.4
SCARF1-205ENST00000571272 RYBPQ8N488 228 aaPredicted RBP17.53■□□□□ 0.4
SCARF1-205ENST00000571272 ANKFN1Q8N957 763 aa17.53■□□□□ 0.4
SCARF1-205ENST00000571272 IL12RB2Q99665 862 aa17.53■□□□□ 0.4
SCARF1-205ENST00000571272 TSPYL2Q9H2G4 693 aaPredicted RBP17.53■□□□□ 0.4
SCARF1-205ENST00000571272 DSEQ9UL01 958 aa17.53■□□□□ 0.4
SCARF1-205ENST00000571272 A0A0J9YYE9 177 aa17.52■□□□□ 0.4
SCARF1-205ENST00000571272 TMX2-CTNND1H3BSU7 103 aa17.52■□□□□ 0.4
SCARF1-205ENST00000571272 DYNC1LI2O43237 492 aaPredicted RBP17.52■□□□□ 0.4
SCARF1-205ENST00000571272 BMP2P12643 396 aa17.52■□□□□ 0.4
SCARF1-205ENST00000571272 CHRM3P20309 590 aa17.52■□□□□ 0.4
SCARF1-205ENST00000571272 ENTPD1P49961 510 aa17.52■□□□□ 0.4
SCARF1-205ENST00000571272 CTBSQ01459 385 aa17.52■□□□□ 0.4
SCARF1-205ENST00000571272 RANBP10Q6VN20 620 aa17.52■□□□□ 0.4
SCARF1-205ENST00000571272 PIM3Q86V86 326 aa17.52■□□□□ 0.4
SCARF1-205ENST00000571272 CPNE9Q8IYJ1 553 aa17.52■□□□□ 0.4
SCARF1-205ENST00000571272 DUS3LQ96G46 650 aaKnown RBP17.52■□□□□ 0.4
SCARF1-205ENST00000571272 RPL10LQ96L21 214 aaKnown RBP17.52■□□□□ 0.4
SCARF1-205ENST00000571272 AKTIPQ9H8T0 292 aa17.52■□□□□ 0.4
SCARF1-205ENST00000571272 CDC14AQ9UNH5 594 aa17.52■□□□□ 0.4
SCARF1-205ENST00000571272 GMEB1Q9Y692 573 aa17.52■□□□□ 0.4
SCARF1-205ENST00000571272 PDCD11Q14690 1871 aaKnown RBP17.52■□□□□ 0.39
SCARF1-205ENST00000571272 RNF103-CHMP3A0A140T963 221 aa17.52■□□□□ 0.39
SCARF1-205ENST00000571272 MATN3O15232 486 aa17.52■□□□□ 0.39
SCARF1-205ENST00000571272 RBP1P09455 135 aa17.52■□□□□ 0.39
SCARF1-205ENST00000571272 TUBA4AP68366 448 aa17.52■□□□□ 0.39
SCARF1-205ENST00000571272 HECTD2Q5U5R9 776 aa17.52■□□□□ 0.39
SCARF1-205ENST00000571272 C8orf82Q6P1X6 216 aaPredicted RBP17.52■□□□□ 0.39
SCARF1-205ENST00000571272 TMEM207Q6UWW9 146 aa17.52■□□□□ 0.39
SCARF1-205ENST00000571272 FASTKD5Q7L8L6 764 aaKnown RBP17.52■□□□□ 0.39
SCARF1-205ENST00000571272 EPHX4Q8IUS5 362 aa17.52■□□□□ 0.39
SCARF1-205ENST00000571272 KLHDC8BQ8IXV7 354 aa17.52■□□□□ 0.39
SCARF1-205ENST00000571272 GPRC5AQ8NFJ5 357 aa17.52■□□□□ 0.39
SCARF1-205ENST00000571272 OR6P1Q8NGX9 317 aa17.52■□□□□ 0.39
SCARF1-205ENST00000571272 HM13Q8TCT9 377 aa17.52■□□□□ 0.39
SCARF1-205ENST00000571272 C19orf60Q96EN9 201 aa17.52■□□□□ 0.39
SCARF1-205ENST00000571272 CHCHD3Q9NX63 227 aaKnown RBP17.52■□□□□ 0.39
SCARF1-205ENST00000571272 MAP10Q9P2G4 905 aa17.52■□□□□ 0.39
SCARF1-205ENST00000571272 NUDT5Q9UKK9 219 aa17.52■□□□□ 0.39
SCARF1-205ENST00000571272 NEU3Q9UQ49 428 aa17.52■□□□□ 0.39
SCARF1-205ENST00000571272 DLGAP1O14490 977 aa17.51■□□□□ 0.39
SCARF1-205ENST00000571272 TREHO43280 583 aa17.51■□□□□ 0.39
SCARF1-205ENST00000571272 WNT3AP56704 352 aa17.51■□□□□ 0.39
SCARF1-205ENST00000571272 PPIL2Q13356 520 aa17.51■□□□□ 0.39
SCARF1-205ENST00000571272 DPP9Q86TI2 863 aa17.51■□□□□ 0.39
SCARF1-205ENST00000571272 OR52K2Q8NGK3 314 aa17.51■□□□□ 0.39
SCARF1-205ENST00000571272 ITFG2Q969R8 447 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms