RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 SLC13A1Q9BZW2 595 aa12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 KLF15Q9UIH9 416 aa12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 GPSM3Q9Y4H4 160 aa12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 AK5Q9Y6K8 562 aa12.45□□□□□ -0.42
CTDNEP1-205ENST00000570828 TRPM6Q9BX84 2022 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 GOLGA4Q13439 2230 aaKnown RBP12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 FAM187AA6NFU0 413 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 MYO1FO00160 1098 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 MUSKO15146 869 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 PCCBP05166 539 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 CYP1A2P05177 515 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 ELFN1P0C7U0 828 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 MYF5P13349 255 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 AMPD1P23109 780 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 CASP14P31944 242 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 HSPA9P38646 679 aaKnown RBP12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 PEX5P50542 639 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 BLKP51451 505 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 POLR2LP62875 67 aaKnown RBP12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 SLC25A11Q02978 314 aaKnown RBP12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 PPARDQ03181 441 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 HADHQ16836 314 aaKnown RBP12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 WSCD2Q2TBF2 565 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 DEFB133Q30KQ1 61 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 CCDC122Q5T0U0 273 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 FAXCQ5TGI0 409 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 BLOC1S3Q6QNY0 202 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 C19orf48Q6RUI8 117 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 TREML4Q6UXN2 200 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 ZSWIM9Q86XI8 627 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 TP53INP2Q8IXH6 220 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 CACTIN-AS1Q8N1I8 211 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 DCBLD1Q8N8Z6 715 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 ATL2Q8NHH9 583 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 ZNF564Q8TBZ8 553 aaPredicted RBP12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 IFI44Q8TCB0 444 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 ECHDC3Q96DC8 303 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 TBATAQ96M53 351 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 LRRC61Q9BV99 259 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 NRSN2Q9GZP1 204 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 ABCG4Q9H172 646 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 TCEAL2Q9H3H9 227 aaPredicted RBP12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 PCDH18Q9HCL0 1135 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 ETNK2Q9NVF9 386 aa12.44□□□□□ -0.42
CTDNEP1-205ENST00000570828 PTPRBP23467 1997 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 PLXNB3Q9ULL4 1909 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 LY6G6EA0A0G2JKS1 128 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 CFAP69A5D8W1 941 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 TMEM110-MUSTN1A8MSY1 372 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 LMO7DNF2Z398 122 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 TPP1O14773 563 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 OPA1O60313 960 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 MT-CO3P00414 261 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 ANXA6P08133 673 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 NFKBIAP25963 317 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 GJC1P36383 396 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 RPIAP49247 311 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 CDH6P55285 790 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 SEMG2Q02383 582 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 SLC10A7Q0GE19 358 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 MTM1Q13496 603 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 C1orf61Q13536 156 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 NFATC4Q14934 902 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 AGERQ15109 404 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 NR0B2Q15466 257 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 CDKN3Q16667 212 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 SKOR2Q2VWA4 1001 aaPredicted RBP12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 TXNRD3NBQ6F5E7 133 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 FSTL5Q8N475 847 aaPredicted RBP12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 MAPK15Q8TD08 544 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 GLMNQ92990 594 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 DEPDC7Q96QD5 511 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 XPO4Q9C0E2 1151 aaKnown RBP12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 CTTNBP2NLQ9P2B4 639 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 RCOR3Q9P2K3 495 aaPredicted RBP12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 SALL4Q9UJQ4 1053 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 DOLKQ9UPQ8 538 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 U3KQA8 63 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 NBEAQ8NFP9 2946 aa12.43□□□□□ -0.42
CTDNEP1-205ENST00000570828 A0A1W2PQ67 120 aa12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 CPED1A4D0V7 1026 aa12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 TRAFD1O14545 582 aaPredicted RBP12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 CBFA2T2O43439 604 aa12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 MAFKO60675 156 aa12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 SOCS5O75159 536 aa12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 GCATO75600 419 aa12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 RECQL5O94762 991 aaPredicted RBP12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 RASGRP1O95267 797 aa12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 ALPIP09923 528 aa12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 TSHRP16473 764 aa12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 HK3P52790 923 aa12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 ADKP55263 362 aaKnown RBP12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 RALGDSQ12967 914 aa12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 TRIM14Q14142 442 aa12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 INPP5AQ14642 412 aa12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 RTP5Q14D33 572 aa12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 ELOCQ15369 112 aa12.42□□□□□ -0.42
CTDNEP1-205ENST00000570828 GUSBP11Q6P575 273 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms