RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 HK2P52789 917 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 GJA9P57773 515 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 ECT2LQ008S8 904 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 Q8N9G6 341 aaPredicted RBP10.95□□□□□ -0.66
PALB2-206ENST00000568219 APPL2Q8NEU8 664 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 MCFD2Q8NI22 146 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 OMA1Q96E52 524 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 MCRS1Q96EZ8 462 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 TSPAN17Q96FV3 270 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 SLC45A3Q96JT2 553 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 RNF38Q9H0F5 515 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 MICAL3Q7RTP6 2002 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 CLDN5O00501 218 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 ACKR2O00590 384 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 CST1P01037 141 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 IL1BP01584 269 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 CPB1P15086 417 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 ST13P50502 369 aaKnown RBP10.95□□□□□ -0.66
PALB2-206ENST00000568219 KCTD2Q14681 263 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 MEP1AQ16819 746 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 NANOGP8Q6NSW7 305 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 ABHD15Q6UXT9 468 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 TIFABQ6ZNK6 161 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 ATG16L2Q8NAA4 619 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 CCDC126Q96EE4 140 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 MRPL57Q9BQC6 102 aaKnown RBP10.95□□□□□ -0.66
PALB2-206ENST00000568219 CYP3A43Q9HB55 503 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 AMBNQ9NP70 447 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 SETD4Q9NVD3 440 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 CD274Q9NZQ7 290 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 GNPTGQ9UJJ9 305 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 PTGDR2Q9Y5Y4 395 aa10.95□□□□□ -0.66
PALB2-206ENST00000568219 CACNA1SQ13698 1873 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 MAGEB16A2A368 324 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 A8MV72 311 aaPredicted RBP10.94□□□□□ -0.66
PALB2-206ENST00000568219 BTBD19C9JJ37 291 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 FADS2O95864 444 aaKnown RBP10.94□□□□□ -0.66
PALB2-206ENST00000568219 PRKACGP22612 351 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 TRIM32Q13049 653 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 TRAF3Q13114 568 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 NAB1Q13506 487 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 LAPTM5Q13571 262 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 GLYATQ6IB77 296 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 UBASH3BQ8TF42 649 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 QKIQ96PU8 341 aaKnown RBP eCLIP10.94□□□□□ -0.66
PALB2-206ENST00000568219 EGFL8Q99944 293 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 NACA2Q9H009 215 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 TOR3AQ9H497 397 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 MTRRQ9UBK8 725 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 MOSPD1Q9UJG1 213 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 RNF112Q9ULX5 631 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 TMED5Q9Y3A6 229 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 TCAF2A6NFQ2 919 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 FAM20BO75063 409 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 CYP7B1O75881 506 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 WDR47O94967 919 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 SIX3O95343 332 aaPredicted RBP10.94□□□□□ -0.66
PALB2-206ENST00000568219 AHSGP02765 367 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 OPRL1P41146 370 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 DPP6P42658 865 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 NR4A2P43354 598 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 NPY2RP49146 381 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 TKTL1P51854 596 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 CLCQ05315 142 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 CDK18Q07002 472 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 TNK2Q07912 1038 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 TUBB3Q13509 450 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 TSTA3Q13630 321 aaPredicted RBP10.94□□□□□ -0.66
PALB2-206ENST00000568219 GPR158Q5T848 1215 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 TMEM236Q5W0B7 351 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 SLC2A7Q6PXP3 512 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 ERMP1Q7Z2K6 904 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 THAP5Q7Z6K1 395 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 LINC00523Q86TU6 105 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 CHERPQ8IWX8 916 aaKnown RBP10.94□□□□□ -0.66
PALB2-206ENST00000568219 ZNF540Q8NDQ6 660 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 RAB2BQ8WUD1 216 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 RMDN1Q96DB5 314 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 TRMT13Q9NUP7 481 aaKnown RBP10.94□□□□□ -0.66
PALB2-206ENST00000568219 SNTG2Q9NY99 539 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 POU2F3Q9UKI9 436 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 ANKRD6Q9Y2G4 727 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 TJP1Q07157 1748 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 GPR25O00155 361 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 IPO13O94829 963 aaKnown RBP10.94□□□□□ -0.66
PALB2-206ENST00000568219 RHOBTB1O94844 696 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 MLNP12872 115 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 LBPP18428 481 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 GGT5P36269 586 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 VBP1P61758 197 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 NR6A1Q15406 480 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 TTC23Q5W5X9 447 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 CNSTQ6PJW8 725 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 SH2D5Q6ZV89 423 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 IGFN1Q86VF2 1251 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 C19orf60Q96EN9 201 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 NSMCE3Q96MG7 304 aa10.94□□□□□ -0.66
PALB2-206ENST00000568219 PRMT7Q9NVM4 692 aaPredicted RBP10.94□□□□□ -0.66
PALB2-206ENST00000568219 AFF4Q9UHB7 1163 aaKnown RBP10.94□□□□□ -0.66
PALB2-206ENST00000568219 KIAA1257Q9ULG3 409 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms